Since volumes can be viewed in Caret, do you really need to connect with AFNI? When I added the AFNI connection, our understanding of volumes was minimal so it is a poorly designed and difficult to use part of Caret and, as far a I know, you are the first person to ask about using this feature in years. For this reason, I would like to remove the AFNI connection from the next release of Caret. You can view both volumes and surface easily in Caret. If you need to use AFNI along with a surface viewer, you might look at using SUMA with AFNI. I believe SUMA can read Caret files.

On Nov 7, 2005, at 1:52 PM, Rishi Kalwani wrote:

Hi,
So...the volume and the surface both have their center (origin) at the anterior commisure....but when i try to connect to AFNI it asks for a Transformation Matrix file. I tried to make transformation matrix files, but wasn't sure what to do.

Do I have to make a matrix file for both the Volume and the Surface?

Since they both have their origins at the AC, do i need to specify different values for the Matrix or Transform Views?

Is it a problem that the surface was made using SureFit, rather than caret5?

thanks
rishi


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