Hi Jan, John Harwell ran your volume on MacOSX with no problem. He used the default peaks. What peaks did you use?
Another quick thing to try in a terminal window: mv ~/.caret5_preferences ~/.caret5_preferences.bak Try segmenting again, anticipating that things like your background color and other preferences/history stored in your caret preferences file won't be accessible. This just tests whether something in your preferences is making caret unhappy. I don't think it will work, but is easy to try. Donna On 06/12/2011 12:59 PM, Jan Derrfuss wrote: > Dear Donna, > > Thank you very much for your reply and for offering to have a look at > the volume! I've uploaded the file; it's name is > anat3d_brain_1mm_fast_range0-255_cropped.nii.gz. Segmentation has worked > for this hemisphere before, so I tend to expect that it will work on > your computer as well. If you indeed find that the segmentation works, > do you know if there's anything in the error report that might help me > figuring out where the problem lies? > > I wasn't trying to segment both hemispheres. In fact, I did try that a > while ago, but found that it doesn't work. ;-) > > No worries about looking at the brain "only" on Monday. There's a number > of other things I can work on, so there's no need to hurry. > > Thanks again, > Jan > > > >> I'm at a loss, too. You're not trying to segment both hems, are you? You >> say >> hemispheres, so I'm guessing not. Those are the kind of circumstances that >> make >> Caret throw up its hands and give up. >> >> If not, upload your volume to the link in this post: >> >> http://brainvis.wustl.edu/pipermail/caret-users/2009-August/001818.html >> >> I'll give it a shot on Monday. Can't get to it sooner, I'm afraid. >> > > > > _______________________________________________ caret-users mailing list [email protected] http://brainvis.wustl.edu/mailman/listinfo/caret-users
