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Hi,

denzo 1.98.4 does NOT show this behaviour, i.e. the cell in the scalepack output file is the same as the cell in the scalepack.log file after post-refinement.

The same applies to the version of HKL2000 we run.

Johan

Phil Jeffrey wrote:
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Miller, Mitchell D. wrote:

The behavior you attribute to early versions of scalepack is still
described in the current manual.


Which assumes that they updated the manual when they updated the software. I've seen the same behavior that Ed Berry reported.

Here is an example with 1.97.2 on Linux, run again just now to check:

Cell from .sca file:
125.486   125.486    59.256    90.000    90.000    90.000

Cell from first .x (denzo output) file:
126.422  126.422   59.575   90.000   90.000   90.000

Cell from postrefinement in scalepack:
125.486 125.486  59.256  90.000  90.000  90.000

It would be very interesting to hear from anyone running 1.97 or later that did NOT see this behavior, since like Ed I've come to rely on/expect this new behavior.

Regards,
Phil Jeffrey
Princeton



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Dr. Johan P. Turkenburg                     X-ray facilities manager
York Structural Biology Laboratory      
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