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Dear Refmacers,

I run refmac 5.2.0019 on a structure with sequence gaps.
Refmac finds those and enters the proper gap links
LINK             ASN A  34                     SER A  37                gap
LINK             LEU A  67                     GLY A  69                gap
LINK             THR A 125                     SER A 127                gap
LINK             SER A 130                     ALA A 132                gap
LINK             GLY A 189                     LYS A 192                gap
LINK             LYS A 208                     LEU A 213                gap
LINK             SER A 221                     GLY A 223                gap
LINK             ALA A 225                     GLN A 227                gap

but does not seem to use them, the link distances are all over the place.

The log also says the links were created, without the '(not to be used)'
statement it
usually gives when it does detect links but does not use them.

If I renumber the residues consecutively, it restrains the links
properly and all is fine. 

????

Thx, br

--------------------------------------------
Bernhard Rupp
www.ruppweb.org              
--------------------------------------------


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