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On Wed, 2006-12-13 at 14:18 -0600, Kerr, Iain wrote: > *** For details on how to be removed from this list visit the *** > *** CCP4 home page http://www.ccp4.ac.uk *** > > > I'm having trouble building Clipper on FC6 (for Coot-0.1.2 install from > source code). By far the easiest way to compile coot and its dependences is to use the auto-build script. > --with-fftw=/usr/local This is in the autobuild script. > during "make check" I get the error (last line): > > make[2]: Leaving directory > `/usr/local/Xray_Programs/CCP4/ccp4-onlylibs-dev/lib/clipper/clipper/contrib' > Making check in cif > make[2]: Entering directory > `/usr/local/Xray_Programs/CCP4/ccp4-onlylibs-dev/lib/clipper/clipper/cif' > make[2]: Warning: File `.deps/cif_data_io.Plo' has modification time > 2e+04 s in the future > source='cif_data_io.cpp' object='cif_data_io.lo' libtool=yes \ > depfile='.deps/cif_data_io.Plo' > tmpdepfile='.deps/cif_data_io.TPlo' \ > depmode=gcc3 /bin/sh ../../depcomp \ > /bin/sh ../../libtool --mode=compile g++ -DHAVE_CONFIG_H -I. > -I. -I../.. -I/usr/local/lib -g -O2 -c -o cif_data_io.lo `test -f > 'cif_data_io.cpp' || echo './'`cif_data_io.cpp > g++ -DHAVE_CONFIG_H -I. -I. -I../.. -I/usr/local/lib -g -O2 -c > cif_data_io.cpp -MT cif_data_io.lo -MD -MP -MF .deps/cif_data_io.TPlo > -fPIC -DPIC -o .libs/cif_data_io.o > cif_data_io.cpp:54:29: error: mmdb/mmdb_mmcif.h: No such file or > directory Yes, we saw this to recently, I think. The solution, when building libs for coot, is to cd into the clipper directory and make, make install there. This does not try to build the clipper applications (this work-around is in the coot auto-build script.) > MMDB_CXXFLAGS="-I/usr/local/lib" should probably be -I/usr/local/include So, to summarise, use the autobuild script for easy building of coot and it's dependencies. If you want to compile them by hand and have difficulties, see the autobuild script to see how various configuration issues are dealt with. Paul.
