A slight variation on this theme is to use 0.5% toluidine blue (in water) as a 
stain.  A 2 to 5 minute soak followed by destaining in hot water for a few 
minutes is all that is required.

On Tue, 11 Dec 2007 12:14:27 -0600
Paul Paukstelis <[EMAIL PROTECTED]> wrote:

     Rongjin,
     
     This may not work for you if your RNA is very small, but I have used the
     coomassie stain described here:
     
     http://newjournal.kcsnet.or.kr/main/j_search/j_download.htm?code=B021105
     
     to stain dissolved complex crystals run on SDS-PAGE gels. I have found
     that it efficiently stains nucleic acids as well as proteins. It takes
     about 24 hours for the stain to reach maximum intensity for the nucleic
     acids.
     
     --paul
     
     Rongjin Guan wrote:
     > Dear All
     >  
     > I am trying to co-crystallize a protein and dsRNA complex, and looking 
     > for methods
     > to detect RNA in the crystals. I am thinking about using Mass Spectrum, 
     > Nanodrop to
     > measure OD280/260, etc, but I wonder if ther are some more sensitive and 
     > reliable ways.
     >  
     > The crystals are grown in high concentration salts; the size is usually 
     > small but I do
     > have several big ones which can be easily fished out. They can be dyed 
     > so definitely
     > not salt crystals.
     >  
     > Thanks
     >  
     > Rongjin Guan
     
     -- 
     Paul Paukstelis, Ph.D.
     Research Associate
     Institute for Cellular and Molecular Biology
     The University of Texas at Austin
     P: 512-471-4778, F: 512-232-3420
     [EMAIL PROTECTED]
     

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