Hello Mariah, Please note that is the CCP4 mailing list. The PyMOL mailing list is at:
http://sourceforge.net/mail/?group_id=4546 In answer to your question, you might first try: dss # If thats doesn't solve your problem, then you can use alter to explicitly assign secondary structure manually as follows: alter A/20-30/, ss='S' alter A/31-40/, ss='L' alter A/41-50/, ss='H' rebuild Cheers, Waren ________________________________________ From: CCP4 bulletin board [mailto:[email protected]] On Behalf Of protein.chemist protein.chemist Sent: Thursday, May 28, 2009 12:53 PM To: [email protected] Subject: [ccp4bb] Pymol Dear All, I have a question about PYMOL. I am trying to make a cartoon diagram of my protein showing the secondary structural elements. However for some reasons it is not showing the N terminal strand and showing that as a loop. Is there any command for selecting a range of residues and showing them as a strand or helix. Thanks for helping. Mariah -- Mariah Jones Department of Biochemistry University of Florida
