On Wed, Jun 23, 2010 at 8:21 AM, Graeme Winter <[email protected] > wrote:
> There will be a cctbx.python dispatcher now which should set > everything up - however if you source setpaths_debug I think this > should make for a happy python as it includes everything from the > dispatcher. > Don't use setpaths_debug - it pollutes the environment and is probably going to be removed in the near future. Otherwise, Graeme is correct, you need to run cctbx.python to access the CCTBX modules. You will still be able to access any modules already available to the python interpreter that you used to build CCTBX (i.e. /usr/bin/python in this case). It is also possible to modify the "pymol.com" script (created by setup2.py in the PyMOL distribution) to use cctbx.python (it just needs to source setpaths.sh from the CCTBX build directory). Maybe we will incorporate this into the Phenix installer in the future - the only drawback to this is that it will probably be missing the Tkinter "external" GUI for PyMOL. -Nat
