Hello, as to the WASP server: We found it to be very useful in the past, but the link is no longer functional! Is there any other address for accessing this server?
Oliver ================================================ PD Dr. Oliver H. Weiergräber Institut für Strukturbiologie und Biophysik ISB-3: Strukturbiochemie Tel.: +49 2461 61-2028 Fax: +49 2461 61-1448 ================================================ ________________________________________ From: CCP4 bulletin board [[email protected]] On Behalf Of Robbie Joosten [[email protected]] Sent: Tuesday, December 21, 2010 9:55 AM To: [email protected] Subject: Re: [ccp4bb] Mg2+ or water You could also try the original WASP here (also for coloured Indo-dutch catholics): http://xray.bmc.uu.se/cgi-bin/gerard/rama_server.pl or you can use the latest WHAT_CHECK that also has an implementation of Nayal and Di Cera's algorithm. Cheers, Robbie > Date: Mon, 20 Dec 2010 22:59:53 +0000 > From: [email protected] > Subject: Re: [ccp4bb] Mg2+ or water > To: [email protected] > > On 20/12/10 21:48, Robbie Joosten wrote: > > > > > > Also note that Mg2+ is significantly smaller than water. It fits in > > places where water cannot go. This doesn't look like a magnesium site > > on first glance. > > I tend to agree with Robbie. I wonder what WASP would say... (if you > use Coot, you can try the "Highly Coordinated Waters" validation test - > a symmetry-enhanced implementation of the Nayal & Di Cera (1996) algorithm). > > Paul. ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------ Forschungszentrum Juelich GmbH 52425 Juelich Sitz der Gesellschaft: Juelich Eingetragen im Handelsregister des Amtsgerichts Dueren Nr. HR B 3498 Vorsitzender des Aufsichtsrats: MinDirig Dr. Karl Eugen Huthmacher Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender), Dr. Ulrich Krafft (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt, Prof. Dr. Sebastian M. Schmidt ------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------
