In this particular case attempting to calculate R-factor using data and model files and making sure that the R you get is not twice as large as published one would entirely suffice -:)
Pavel On Fri, Apr 12, 2013 at 12:42 PM, Eugene Osipov <e.m.osi...@gmail.com>wrote: > In my opinion pdb must perform more strict checks of structures. I can > remember at least 2 structures without OXT entry for C terminal tail . Of > course rcsb won't accept my fixes. As graduate student I am not sure that > I can point out mistakes to unknown author > 12.04.2013 23:34 пользователь "Eugene Osipov" <e.m.osi...@gmail.com> > написал: > > Not only 118, look at 119 . It seems also that residues 82-88 incorrectly >> placed . I think that authors (if they are reading this board ) must fix >> errors. To be honest this is not first time I see such models. >> 12.04.2013 23:17 пользователь "Michel Fodje" <michel.fo...@lightsource.ca> >> написал: >> >> By the way, you will need to show symmetry atoms to see the problem. >> >> >-----Original Message----- >> >From: CCP4 bulletin board [mailto:CCP4BB@JISCMAIL.AC.UK] On Behalf Of >> >Michel Fodje >> >Sent: April-12-13 1:14 PM >> >To: CCP4BB@JISCMAIL.AC.UK >> >Subject: [ccp4bb] Puzzling Structure >> > >> >Has anyone else noticed a problem with the structure of the N-terminal >> >capsid domain of HIV-2 PDB 2wlv. >> > >> >Load it up to in coot and navigate to residue B118. >> > >> > >> > >> >/Michel. >> >>
