In cases like this, I keep FAD around during all steps starting from cell 
lysis, purification, dialysis and even crystallization. In one case we added 
FAD to protein such that the  protein: FAD ratio was 1 prior to setting up 
crystallization trials.
Hope that helps.
Harkewal 

Sent from my iPad

> On Mar 13, 2014, at 5:40 PM, "Benini Stefano (P)" <[email protected]> 
> wrote:
> 
> Dear All (those dealing with wetlab stuff..),
> 
> While purifying a FAD containing protein we lose part of the FAD (on the gel 
> filtration we clearly see two bands corresponding to holoprotein and free 
> FAD).
> 
> We obtain crystals but diffracting to only about 4 A despite their beautiful 
> look. Our hypothesis is that the crystals contain a population of molecules 
> with and without FAD (?).
> 
> The questions are:
> 
> 1) how to keep FAD bound to the protein during purification and 
> crystallization?
> 
> 2) how to completely remove FAD from the protein? 
> 
> Thank you very much for any help provided!
> 
> Best regards
> 
> Stefano (part-time wetlab person)
> 
> 
> Dr Stefano Benini, Ph.D.
> Assistant Professor
> 
> First International workshop: "Molecular Basis of Fire Blight", Bolzano 
> 15.10.2014
> 
> Laboratory homepage:
> http://pro.unibz.it/staff2/sbenini/B2Cl.htm
> 
> Personal homepage
> http://pro.unibz.it/staff2/sbenini/
> 
> "I don't like anything that's fake and I hate pretenders!"
> 
> *********************************************
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