Dear Ryan Gumpper, entering the keywords 'PDB motif search' at www.ixquick.com led me to the Swiss PDB Viewer Tutorial on "3D motif search" (http://spdbv.vital-it.ch/motif3Dsearch_tut.html) which sounds very much like what you are looking for.
Regards, Tim On 07/07/2014 07:45 PM, Ryan Henry Gumpper wrote: > Sorry for the off topic post, but I have a relevant question that > someone may be able to help me with. > > > I am looking to conduct a PDB search to see how many proteins contain > the simple 1 Fe 4 Cys so called rubredoxin like site. Is there a tool > that is able to do this that would be based more on structure instead of > sequence? > > > Thank you in advance for any and all of your replies! > > > Regards, > > Ryan Gumpper​ > > -- Dr Tim Gruene Institut fuer anorganische Chemie Tammannstr. 4 D-37077 Goettingen GPG Key ID = A46BEE1A
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