Hi Dialing,
86% favoured can actually be quite okay for an initial model. As long as
it doesn't have 14% in the disallowed region, the vast majority of
residues will be correct, or close enough to the correct answer that
they can be fixed easily. Of course, such a model will need tweaking,
but this is more or less the point of calling it an 'initial' model.
Cheers,
Robbie
On 01/12/2015 01:18 PM, Dialing Pretty wrote:
Dear All，
If an initial PDB has only 86% residues in the Ramachandran favored region, it
would mean there is a significant error (for example significant length of
protein fragment in the total protein assigned to the wrong electron density map
position) , right?
Dialing
