Hi Daniel,

Thank you for suggestion. I want to ask that in which format i have to
saved both these files. I am not getting any option to directly download
these result. So, I have to paste these results in notepad file. I am not
able to get that in which format i have to save it then.






Thanks & Regards,


VIKRAM DALAL
Research Scholar
Macromolecular Crystallographic Unit
Department of Biotechnology
Indian Institute of Technology
Roorkee (INDIA)







On Fri, Oct 21, 2016 at 3:27 PM, Daniel Rigden <[email protected]>
wrote:

> [image: Boxbe] <https://www.boxbe.com/overview> Daniel Rigden (
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> Dear Vikram
> Your file aat000_03_05.200_v1_3
> <http://rosettaserver.bakerlab.org/downloads/fragments/45590/aat000_03_05.200_v1_3>
> contains fragments of 3 residues length, the other one contains 9-residue
> fragments. Download these to your own computer and then, in the CCP4i
> interface to AMPLE, use the Browse buttons in the Fragment Files section to
> locate them as 3mers and 9mers respectively. Â  Once you've told AMPLE
> where your Rosetta installation is, and filled in the other Input Files as
> normal, you're good to go.
>
> Best wishes
>
> Daniel
>
> On 21/10/16 10:50, Vikram Dalal wrote:
>
> Hi eveyone,
>
> I want to run the ample in ccp4i. I have generated the files for my
> sequence using robetta fragment library server. But, I do not know how to
> use these fragments in in ccp4i (3 mers and 9 mers). I got these results
> after submission of my sequences in robetta.
>
> Your results are available at:
>
> Result Details
> http://rosettaserver.bakerlab.org/fragmentqueue.jsp?id=45590
>
> Download Fragment Files
> http://rosettaserver.bakerlab.org/downloads/fragments/45590/
> aat000_03_05.200_v1_3
> http://rosettaserver.bakerlab.org/downloads/fragments/45590/
> aat000_09_05.200_v1_3
>
>
>
>
> Thanks & Regards,
>
>
> VIKRAM DALAL
> Research Scholar
> Macromolecular Crystallographic Unit
> Department of Biotechnology
> Indian Institute of TechnologyÂ
> Roorkee (INDIA)
>
>
>
>
>
>
>
> --
> Dr Daniel John Rigden                 Tel:(+44) 151 795 4467
> Institute of Integrative Biology      FAX:(+44) 151 795 4406
> Room 101, Biosciences Building
> University of Liverpool               http://pcwww.liverpool.ac.uk/~drigden/
> Crown St.,
> Liverpool L69 7ZB, U.K.
>
>
>

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