Hi Vikram
They are regular text files. You don't need to view/edit. Just right
click on the link and 'Save as' somewhere locally.
Daniel
On 21/10/16 11:12, Vikram Dalal wrote:
Hi Daniel,
Thank you for suggestion. I want to ask that in which format i have to
saved both these files. I am not getting any option to directly
download these result. So, I have to paste these results in notepad
files. I am not able to get that in which format i have to save it then.
*
*
Thanks & Regards,
VIKRAM DALAL
Research Scholar
Macromolecular Crystallographic Unit
Department of Biotechnology
Indian Institute of Technology
Roorkee (INDIA)
On Fri, Oct 21, 2016 at 3:27 PM, Daniel Rigden
<[email protected] <mailto:[email protected]>> wrote:
Boxbe <https://www.boxbe.com/overview> Daniel Rigden
([email protected] <mailto:[email protected]>) is not
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Dear Vikram
Your file aat000_03_05.200_v1_3
<http://rosettaserver.bakerlab.org/downloads/fragments/45590/aat000_03_05.200_v1_3>
contains fragments of 3 residues length, the other one contains
9-residue fragments. Download these to your own computer and then,
in the CCP4i interface to AMPLE, use the Browse buttons in the
Fragment Files section to locate them as 3mers and 9mers
respectively. Â Once you've told AMPLE where your Rosetta
installation is, and filled in the other Input Files as normal,
you're good to go.
Best wishes
Daniel
On 21/10/16 10:50, Vikram Dalal wrote:
Hi eveyone,
I want to run the ample in ccp4i. I have generated the files for
my sequence using robetta fragment library server. But, I do not
know how to use these fragments in in ccp4i (3 mers and 9 mers).
I got these results after submission of my sequences in robetta.
Your results are available at:
Result Details
http://rosettaserver.bakerlab.org/fragmentqueue.jsp?id=45590
<http://rosettaserver.bakerlab.org/fragmentqueue.jsp?id=45590>
Download Fragment Files
http://rosettaserver.bakerlab.org/downloads/fragments/45590/aat000_03_05.200_v1_3
<http://rosettaserver.bakerlab.org/downloads/fragments/45590/aat000_03_05.200_v1_3>
http://rosettaserver.bakerlab.org/downloads/fragments/45590/aat000_09_05.200_v1_3
<http://rosettaserver.bakerlab.org/downloads/fragments/45590/aat000_09_05.200_v1_3>
*
*
Thanks & Regards,
VIKRAM DALAL
Research Scholar
Macromolecular Crystallographic Unit
Department of Biotechnology
Indian Institute of TechnologyÂ
Roorkee (INDIA)
--
Dr Daniel John Rigden Tel:(+44) 151 795 4467
Institute of Integrative Biology FAX:(+44) 151 795 4406
Room 101, Biosciences Building
University of Liverpoolhttp://pcwww.liverpool.ac.uk/~drigden/
<http://pcwww.liverpool.ac.uk/%7Edrigden/>
Crown St.,
Liverpool L69 7ZB, U.K.
--
Dr Daniel John Rigden Tel:(+44) 151 795 4467
Institute of Integrative Biology FAX:(+44) 151 795 4406
Room 101, Biosciences Building
University of Liverpoolhttp://pcwww.liverpool.ac.uk/~drigden/
Crown St.,
Liverpool L69 7ZB, U.K.
