Dear Kyle, As other non-CCP4 solutions have also been suggested, perhaps I can suggest using PyMOL? https://pymolwiki.org/index.php/Align Here's a nice wiki article about what you can do with the align command.
If you're already familiar with scripting languages it's quite easy, and you can load your already superimposed structures and calculate on the selection you want. Hope this helps, Folmer Fredslund tir. 17. sep. 2019 15.42 skrev Kyle Gregory < [email protected]>: > Hi all, > > What is the best/easiest way to calculate RMSD of a loop for 2 c-alpha > aligned structures? > Thought I could do this in Coot but I only see this if I align the > specific loops, which I don't want to do. > > Thanks, > > Kyle > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCP4BB&A=1
