Hi all, Apologies for the non-CCP4 question:
I’m attempting to use XDS to process some data from the Eiger detector at the AMX beamline (NSLS-2 17-ID-1). To read in the Neggia library, my XDS.INP contains the line “LIB=/…path.../dectris-neggia-mac.so" I’ve successfully used the same dectris-neggia-mac.so library file for years, but now I obtain an error message (see error message #1 below), which suggests that the library file is now problematic. For this reason, I grabbed a copy of dectris-neggia.so from https://strucbio.biologie.uni-konstanz.de/pub/mac_bin/ (thank you!). Alas, this file also gives a similar, but non-identical error (error message #2 below). In both cases, the error appears to involve an inability to open the neggia library. I’ve double-checked that the library files are indeed present, and that I’m specifying the correct path. This error seems to be associated with the current version of XDS, since a data set that I could process last year without problem is now giving an error (same data, same computer—Intel Mac running OSX 10.14.6). I’m not sure how to proceed. Any suggestions welcome. Thanks, Pat Loll --------------------------------------------------------------------------------------- Patrick J. Loll, Ph. D. (he, him, his) Professor of Biochemistry & Molecular Biology Drexel University College of Medicine Room 10-102 New College Building 245 N. 15th St., Mailstop 497 Philadelphia, PA 19102 USA (215) 762-7706 [email protected] [email protected] _________ERROR MESSAGE #1________________ master_file=../G7_558_master.h5 [generic_data_plugin] - INFO - generic_open + library = </sw/share/xtal/XDS/dectris-neggia-mac.so> + template_name = <../G7_558_master.h5> + dll_filename = </sw/share/xtal/XDS/dectris-neggia-mac.so> + image_data_filename = <../G7_558_master.h5> [generic_data_plugin] - ERROR - Cannot open Handle: dlopen(/sw/share/xtal/XDS/d ectris-neggia-mac.so, 258): no suitable image found. Did find: /sw/share/xtal /XDS/dectris-neggia-mac.so: file too short /sw/share/xtal/XDS/dectris-neggia-m ac.so: file too short generic_getfrm: could not open /sw/share/xtal/XDS/dectris-neggia-mac.so ier= -2 [generic_data_plugin] - INFO - generic_get_header [generic_data_plugin] - ERROR - Cannot open Handle ? generic_getfrm: could not get header from ../G7_558_master.h5 ier= -1 INFO(1:5)=vendor/major version/minor version/patch/timestamp= 1**** 0 0 0 generic_getfrm: data are from Dectris generic_getfrm: expected info_array(2)=0 but got 123456789 !!! ERROR !!! Unknown image format: ../G7_558_000001.h5 _________ERROR MESSAGE #2________________ master_file=../G7_558_master.h5 [generic_data_plugin] - INFO - generic_open + library = <~/Desktop/dectris-neggia.so> + template_name = <../G7_558_master.h5> + dll_filename = <~/Desktop/dectris-neggia.so> + image_data_filename = <../G7_558_master.h5> [generic_data_plugin] - ERROR - Cannot open Handle: dlopen(~/Desktop/dectris-ne ggia.so, 258): image not found generic_getfrm: could not open ~/Desktop/dectris-neggia.so ier= -2 [generic_data_plugin] - INFO - generic_get_header [generic_data_plugin] - ERROR - Cannot open Handle ? generic_getfrm: could not get header from ../G7_558_master.h5 ier= -1 INFO(1:5)=vendor/major version/minor version/patch/timestamp= 1**** 0 0 0 generic_getfrm: data are from Dectris generic_getfrm: expected info_array(2)=0 but got 123456789 !!! ERROR !!! Unknown image format: ../G7_558_000001.h5 ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.cgi?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
