Hi Patrick, I have not seen similar reports.
The 2nd error message has ~/Desktop/dectris-neggia.so, 258): image not found so maybe the ~ is not understood; try to specify more explicitly LIB=/Users/ploll/Desktop/dectris-neggia.so or whatever the name of your $HOME is. Could you try durin-plugin.so ? Possibly your machine has a problem; could you try a different Mac? If all fails, send me a link to the data. Best wishes, Kay On Tue, 31 May 2022 15:18:23 -0400, Patrick Loll <[email protected]> wrote: >Hi all, > >Apologies for the non-CCP4 question: > >I’m attempting to use XDS to process some data from the Eiger detector at the >AMX beamline (NSLS-2 17-ID-1). > >To read in the Neggia library, my XDS.INP contains the line >“LIB=/…path.../dectris-neggia-mac.so" > >I’ve successfully used the same dectris-neggia-mac.so library file for years, >but now I obtain an error message (see error message #1 below), which suggests >that the library file is now problematic. > >For this reason, I grabbed a copy of dectris-neggia.so from >https://strucbio.biologie.uni-konstanz.de/pub/mac_bin/ (thank you!). Alas, >this file also gives a similar, but non-identical error (error message #2 >below). > >In both cases, the error appears to involve an inability to open the neggia >library. I’ve double-checked that the library files are indeed present, and >that I’m specifying the correct path. > >This error seems to be associated with the current version of XDS, since a >data set that I could process last year without problem is now giving an error >(same data, same computer—Intel Mac running OSX 10.14.6). > >I’m not sure how to proceed. Any suggestions welcome. > >Thanks, > >Pat Loll > >--------------------------------------------------------------------------------------- >Patrick J. Loll, Ph. D. (he, him, his) >Professor of Biochemistry & Molecular Biology >Drexel University College of Medicine >Room 10-102 New College Building >245 N. 15th St., Mailstop 497 >Philadelphia, PA 19102 USA > >(215) 762-7706 >[email protected] >[email protected] > > > >_________ERROR MESSAGE #1________________ > >master_file=../G7_558_master.h5 > [generic_data_plugin] - INFO - generic_open > + library = </sw/share/xtal/XDS/dectris-neggia-mac.so> > + template_name = <../G7_558_master.h5> > + dll_filename = </sw/share/xtal/XDS/dectris-neggia-mac.so> > + image_data_filename = <../G7_558_master.h5> > [generic_data_plugin] - ERROR - Cannot open Handle: > dlopen(/sw/share/xtal/XDS/d > ectris-neggia-mac.so, 258): no suitable image found. Did find: > /sw/share/xtal > /XDS/dectris-neggia-mac.so: file too short > /sw/share/xtal/XDS/dectris-neggia-m > ac.so: file too short > generic_getfrm: could not open /sw/share/xtal/XDS/dectris-neggia-mac.so ier= > -2 > [generic_data_plugin] - INFO - generic_get_header > [generic_data_plugin] - ERROR - Cannot open Handle > ? > generic_getfrm: could not get header from ../G7_558_master.h5 ier= -1 >INFO(1:5)=vendor/major version/minor version/patch/timestamp= 1**** 0 0 > 0 > generic_getfrm: data are from Dectris > generic_getfrm: expected info_array(2)=0 but got 123456789 > > !!! ERROR !!! Unknown image format: ../G7_558_000001.h5 > > > >_________ERROR MESSAGE #2________________ > >master_file=../G7_558_master.h5 > [generic_data_plugin] - INFO - generic_open > + library = <~/Desktop/dectris-neggia.so> > + template_name = <../G7_558_master.h5> > + dll_filename = <~/Desktop/dectris-neggia.so> > + image_data_filename = <../G7_558_master.h5> > [generic_data_plugin] - ERROR - Cannot open Handle: > dlopen(~/Desktop/dectris-ne > ggia.so, 258): image not found > generic_getfrm: could not open ~/Desktop/dectris-neggia.so ier= -2 > [generic_data_plugin] - INFO - generic_get_header > [generic_data_plugin] - ERROR - Cannot open Handle > ? > generic_getfrm: could not get header from ../G7_558_master.h5 ier= -1 >INFO(1:5)=vendor/major version/minor version/patch/timestamp= 1**** 0 0 > 0 > generic_getfrm: data are from Dectris > generic_getfrm: expected info_array(2)=0 but got 123456789 > > !!! ERROR !!! Unknown image format: ../G7_558_000001.h5 >######################################################################## > >To unsubscribe from the CCP4BB list, click the following link: >https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.cgi?SUBED1=CCP4BB&A=1 > >This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing >list hosted by www.jiscmail.ac.uk, terms & conditions are available at >https://www.jiscmail.ac.uk/policyandsecurity/ ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
