Hi All, along those lines, phenix.find_tls_groups (also in the GUI) available in Phenix since 2010, the tool splits model into TLS groups fast (up to a minute). Some notes on underlying method:
https://phenix-online.org/phenixwebsite_static/mainsite/files/presentations/latest/afonine_find_tls_groups.pdf Pavel On Fri, Jul 17, 2026 at 7:44 AM John Bacik < [email protected]> wrote: > Hi Carlos, > > If it’s helpful, I have developed a Python-based tool for TLS segment > optimization based on the published TLSMD algorithm. I have been testing it > myself and plan to make it available on GitHub once I’ve cleaned it up a > bit, but I would be happy to share the current version if you would like to > try it. > All the best, > John > > > > On Thursday, July 16, 2026 at 04:10:47 AM CDT, Carlos CONTRERAS MARTEL < > [email protected]> wrote: > > > Hi > > somebody knows if the Ethan Merrit TLS Motion Determination Home (TLSMD > server) will be back to life on day? > > http://skuld.bmsc.washington.edu/~tlsmd/ > > > or if there is a mirror somewhere ? > > All the best > > Carlos > > > -- > Carlos CONTRERAS MARTEL, Ph.D. > (CRHC CNRS) > > [email protected] > > "Pneumococcus Group" > Institut de Biologie Structurale > UMR5075 CEA-CNRS-UGA > > IBS (PG) > Campus EPN > 71, avenue des Martyrs > CS 10090 > 38044 Grenoble CEDEX 9 > FRANCE > > > tel : (+33) (0)4 57 42 86 41 > > ######################################################################## > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > > This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a > mailing list hosted by www.jiscmail.ac.uk, terms & conditions are > available at https://www.jiscmail.ac.uk/policyandsecurity/ > > ------------------------------ > > To unsubscribe from the CCP4BB list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 > ######################################################################## To unsubscribe from the CCP4BB list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/WA-JISC.exe?SUBED1=CCP4BB&A=1 This message was issued to members of www.jiscmail.ac.uk/CCP4BB, a mailing list hosted by www.jiscmail.ac.uk, terms & conditions are available at https://www.jiscmail.ac.uk/policyandsecurity/
