Dear Dmitry,
On 16 April 2011 03:15, Dmitry Katsubo <dmitry.kats...@gmail.com> wrote:
> Dear CDK developers,
>
> I have run into minor issue with CDK binary releases (1.2.x or 1.3.x -
> does not matter). The problem is that cdk-1.3.8.jar contains CDK class +
> the classes from all dependent libraries. This makes it impossible for
> me to e.g. change the implementation of Log4j, because if JVM finds
> Log4j classes in cdk-1.3.8.jar, it will not continue searching the
> classpath, so I am stick to the version, which is bundled into CDK.
> Things get worse with slf4j, which is split into API and implementation:
> in case the API classes are taken from cdk-1.3.8.jar, they are binary
> not compatible with slf4j implementations available in the classpath
> (which e.g. have the higher implementation version), causing
> difficult-to-trace-down MethodNotFoundExceptions at runtime.
>
> Perhaps, doing a correct splitting into smaller modules + tracing the
> dependencies is the best solution. It looks like Maven can help here.
> Finally I wonder, who is using CDK in Maven-based project and are there
> any ready-to-use POMs / Maven repositories? If not, is there anybody
> interested in modularizing CDK?
>
> We are using CDK in couple of maven projects and have uploaded CDK jars
into
http://ambit.uni-plovdiv.bg:8083/nexus/index.html#nexus-search;quick~cdk
The repository is publicly accessible (not writable, but if you would like
write access, send me a message)
<repository>
<id>ambit-plovdiv</id>
<url>
http://ambit.uni-plovdiv.bg:8083/nexus/content/repositories/thirdparty</url>
<snapshots>
<enabled>false</enabled>
</snapshots>
</repository>
The cdk jars , since 1.3.8 are available as separate artifacts, without any
dependencies, e.g.
<dependency>
<groupId>org.openscience.cdk</groupId>
<artifactId>cdk-core</artifactId>
<version>${cdk.version}</version>
</dependency>
<dependency>
<groupId>org.openscience.cdk</groupId>
<artifactId>cdk-isomorphism</artifactId>
<version>${cdk.version}</version>
</dependency>
<dependency>
<groupId>org.openscience.cdk</groupId>
<artifactId>cdk-atomtype</artifactId>
<version>${cdk.version}</version>
</dependency>
<dependency>
<groupId>org.openscience.cdk</groupId>
<artifactId>cdk-data</artifactId>
<version>${cdk.version}</version>
</dependency>
Hope this might help,
Nina
> Thanks
>
> --
> With best regards,
> Dmitry
>
>
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------------------------------------------------------------------------------
Benefiting from Server Virtualization: Beyond Initial Workload
Consolidation -- Increasing the use of server virtualization is a top
priority.Virtualization can reduce costs, simplify management, and improve
application availability and disaster protection. Learn more about boosting
the value of server virtualization. http://p.sf.net/sfu/vmware-sfdev2dev
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