Hi Dmitry,

I had the same issue with logging. It worked for me in 1.2.7 and stopped 
working in 1.3.x

I got a mail from this thread from Nina were she put the data about their maven 
repo of cdk. I tried and it works great!

Also my logging is working again as expected.

Nina, thanks for that repository.

Dmitry, here the mail from Nina, which you might have missed. I confirm it 
works:


We are using CDK in couple of maven projects and have uploaded CDK jars into 

http://ambit.uni-plovdiv.bg:8083/nexus/index.html#nexus-search;quick~cdk

The repository is publicly accessible (not writable, but if you would like 
write access, send me a message)

       <repository>
         <id>ambit-plovdiv</id>
          
<url>http://ambit.uni-plovdiv.bg:8083/nexus/content/repositories/thirdparty</url>
           <snapshots>
       <enabled>false</enabled>
      </snapshots>
        </repository>


The cdk jars , since 1.3.8 are available as separate artifacts, without any 
dependencies, e.g. 

      <dependency>
         <groupId>org.openscience.cdk</groupId>
         <artifactId>cdk-core</artifactId>
         <version>${cdk.version}</version>
        
        
        </dependency>
        <dependency>
         <groupId>org.openscience.cdk</groupId>
         <artifactId>cdk-isomorphism</artifactId>
         <version>${cdk.version}</version>
        </dependency>
        <dependency>
         <groupId>org.openscience.cdk</groupId>
         <artifactId>cdk-atomtype</artifactId>
         <version>${cdk.version}</version>
        </dependency>
            <dependency>
         <groupId>org.openscience.cdk</groupId>
         <artifactId>cdk-data</artifactId>
         <version>${cdk.version}</version>
        </dependency>


Hope this might help,

Nina

> Date: Thu, 21 Apr 2011 14:46:12 +0200
> From: dmitry.kats...@gmail.com
> To: cdk-user@lists.sourceforge.net
> Subject: Re: [Cdk-user] CDK package contains all dependant libraries, which 
> cause a problem
> 
> Hi Nina,
> 
> Thanks for reply.
> 
> On 16.04.2011 7:45, Nina Jeliazkova wrote:
> > Egon,
> > 
> > On 16 April 2011 08:19, Egon Willighagen <egon.willigha...@gmail.com> wrote:
> > 
> >> The single big jar is a much requested feature by
> >> users, but the build system starts with a modularized approach.
> >> 
> >> ant clean dist-all test-dist-all
> >> 
> >> and check the output in dist/jar.
> >> 
> >> Dependencies are defined in src/META-INF/*.*depends
> > 
> > Deploying and configuring all separate jars into a maven dependencies /
> > repository is quite a work though.
> > 
> > I would like to suggest the following.  The project that is used to
> > deploy jars into the maven repository in my previous mail is this one
> > (the URL has already been sent to this list):
> > 
> > https://ambit.svn.sourceforge.net/svnroot/ambit/trunk/cdk-maven 
> > 
> > It doesn't build the CDK, just imposes maven structure of the modules
> > and deploys the binary jars into a repository.  It should be trivial to
> > extend CDK build file to copy the jars into the mavenized structure of
> > this project. The proposal is to have the mavenized structure above
> > into the CDK source tree, just next to the current one, and use it to
> > deploy the jars into a maven repository. (I know some prefer to keep the
> > ant build system as it is :)
> 
> Have you just started this project, or you have already successfully
> build and deployed jars as maven artifacts? In later case perhaps you
> could share the URL for maven repo (in case it is available "for the
> world")?
> 
> > CDK jars not being registered in a public maven repository is a major
> > show stopper of making derivative projects available via maven
> > infrastructure, hope this could help move things in that direction.
> 
> True. Until that happens, I will also need to deploy CDK to local Maven
> repo, but I would love to use something which is publicly available.
> 
> --
> With best regards,
> Dmitry
> 
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application availability and disaster protection. Learn more about boosting 
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