nihmmayerm wrote:
Hi,The problem was that coot choked on the TER and BREAK lines in the PDB, once I removed these 0.4.1 reads the phenix PDBs fine.
Hmm... where, I suspect, "choked on" means "parse according to the definition". I have not heard before of a BREAK card and AFAICS, it is not part of the 2.3 standard - so I am not surprised that Coot does not parse your file in the way you might expect.
Paul.
