Hi,
as pointed out by Jan this should certainly not happen. If I understand
the issue right then a LINK is created for every real space refinement.
Which version of Coot are you using, which operating system, etc. I
think we need some more information to fix this. BTW I assume your pdb
file is free of (unwanted) LINK(R) records now (please check - maybe
your refinement program created these...).
Bernhard
On 05/11/2014 06:16, ly wrote:
Hi Jan,
Thank you very much!
It worked.
Another problem is that the unexpected linker always formed during fit
the residue to the map. Are there any parameter setting or python
script using for the function of Real Space Refinement or Regularize
zone to avoid this problem ?
Dorothy
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Dr. Bernhard Lohkamp
Associate Professor/Docent
Div. Molecular Structural Biology
Dept. of Medical Biochemistry and Biophysics (MBB)
Karolinska Institutet
S-17177 Stockholm
Sweden
phone: (+46) 08-52487651
fax: (+46) 08-327626
email: [email protected]
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