Dear All, I have a query related to the jiggle fit option in Coot. I want to use it to fit the model in the map obtained by electron microscopy. My query may seem very lame and naive, but how we can use this option, do we have to go to scripts via: calculate > scripting > scheme and enter the values in: fit-to-map-by-random-jiggle imol chain_id resno ins_code n_trials jiggle_scale_factor I am not able to use it though. is there any other option in GUI available.
what does the ins_code here refer to ? and if by resno is the residue number or the number of residues, how we can specify the residues to use for the jiggle fit. I have converted the mrc map to ccp4 format using em2em, when I open it in coot, i am able to do the model/fit/refine but the undo option doesn't work. Kindly help. Looking forward for the help -- Shivu
