Dear Shivu,
you can define a keybinding for jiggle fit like this:
def key_binding_func_7():
using_active_atom(fit_to_map_by_random_jiggle,
"aa_imol", "aa_chain_id", "aa_res_no",
"aa_ins_code",
100, 1.0)
add_key_binding("Jiggle Fit", "J", lambda: key_binding_func_7())
and put it to "my_keybindings.py" in ~/.coot-preferences
Best regards,
Jan
On 04/29/2015 01:35 AM, onetwo wrote:
Dear All,
I have a query related to the jiggle fit option in Coot. I want to use
it to fit the model in the map obtained by electron microscopy.
My query may seem very lame and naive, but how we can use this option,
do we have to go to scripts via: calculate > scripting > scheme
and enter the values in: fit-to-map-by-random-jiggle imol chain_id
resno ins_code n_trials jiggle_scale_factor
I am not able to use it though. is there any other option in GUI
available.
what does the ins_code here refer to ? and if by resno is the residue
number or the number of residues, how we can specify the residues to use
for the jiggle fit.
I have converted the mrc map to ccp4 format using em2em, when I open
it in coot, i am able to do the model/fit/refine but the undo option
doesn't work.
Kindly help.
Looking forward for the help
--
Shivu
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--
Jan Stransky, PhD student
Institute of Biotechnology, AS CR
Laboratory of structure and function of biomolecules
Nad Safinou II 366
Vestec
Czech Republic
Tel.: +420226201570
