On 13/05/2020 10:04, Nikos Pinotsis wrote:
I noticed that other non bonded atoms (Na, Cl etc ) have a sphere and cross which is quite ok.


OK.


I can see a possibly reason why this is not the case for water molecules.


I liked the way that PyMOL does it.


In any case larger spheres resolve the problem. Where can I get the patch?



I didn't mention it because I though that if you can compile coot, then you know where to get it. But for the record:


https://github.com/pemsley/coot/commits/refinement

specifically this one:

https://github.com/pemsley/coot/commit/703ff0a19d9e9bfcb16840aa1c83ac7a0c4bd000

I am also working on the gtk3 branch these days

https://github.com/pemsley/coot/commits/gtk3


FWIW, I need to spend more time getting the auto-builder to work (for others) - and 0.9.1 out the door.


Paul.

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