On 13/10/2020 17:36, Frank von Delft wrote:
That video is rather dramatic...
:-)
did it do that on its own, or was there dragging-by-mouse going on?
"No, she went of her own accord."
(no dragging)
The jelly/morphiness seems to allow a greater radius of convergence than
rigid-body refinement.
The tools that I've been developing for 0.9 have been predicated on
having a reasonable guess at the fold - mainchain only will do. If you
have that [1], then you can place and build a model pretty
lickety-split. (I mean for proteins, not RNA.)
The "youtube tutorial" - is that linked on the coot page? I looked
but couldn't obviously find it. (That's the mrc page,
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
<https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/files/movies/refine-example-nov.ogv>)
The two relevant tutorials are the SBGrid one
https://www.youtube.com/watch?v=hhB8qUBBnJQ
and the RNA one
https://www.youtube.com/watch?v=Zzim3SXnDSk
presumably Sorbhi meant the latter.
Also related is Ana's CCP4 presentation:
https://www.youtube.com/watch?v=HJr-hJEF8oA
These are all a bit out of date as I've moved the GUI around and
improved the refinement. I intend to do a modern version - that includes
demonstrating proportional editing. I need to get 0.9.1 released first
though.
Paul.
[1] as opposed the output of buccaneer or map_to_model, I mean.
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