> Even better, it could be solved in (Win)Coot. I suppose that Gtk is 
> automatically
> calling setlocale (LC_ALL, "") in one of its functions. Coot could then call:
> setlocale(LC_NUMERIC, "C");

This is what is done for a wee while. So, this is fixed already in 0.9.6. (I 
guess not in CCP4 yet but available form my site: 
https://bernhardcl.github.io/coot/wincoot-download.html).
NB: all other efforts to set it in the dos command (and even in the Windows 
setting) are less reliable but may work.

B

> On Tue, 20 Jul 2021 at 16:32, Robbie Joosten <robbie_joos...@hotmail.com>
> wrote:
> >
> > WinCoot inherits your regional setting from windows. If you change your
> number format there to using a period instead of a comma, the problem is
> solved permanently.
> >
> > Cheers,
> > Robbie
> >
> > > -----Original Message-----
> > > From: Mailing list for users of COOT Crystallographic Software
> > > <COOT@JISCMAIL.AC.UK> On Behalf Of Andrea Smith
> > > Sent: Tuesday, July 20, 2021 13:10
> > > To: COOT@JISCMAIL.AC.UK
> > > Subject: Re: "broken" pdb after merging the ligand
> > >
> > > Changing the commas back to dots worked. Now I uploaded the pdb back
> > > to my ccp4 cloud project, but refmac does not recognize it.
> > >
> > > What do I need to do with the uploaded pdb so refmac would use it
> > > for refinement?
> > >
> > >
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***************************************************

Dr. Bernhard Lohkamp | Associate Professor/Lektor/Docent

Div. Molecular Structural Biology/Biomedicum D9
Dept. of Medical Biochemistry and Biophysics (MBB) |
Karolinska Institutet
SE-171 77 Stockholm
Sweden
+46 8 52487055
bernhard.lohk...@ki.se | ki.se


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