On 23/02/2022 15:25, Brendan Farrell wrote:
Hi all,

This may be a simple fix or maybe impossible, but I can't find a solution and 
am hoping somebody can help...

I am trying to fix some Ramachandran outliers while refining, and I see these 
spheres (see attachment) at the C alpha of each residue, which I think can be 
coloured red or green, and I have assumed are Ramachandran indicators for each 
residue.


That's right.


  I mostly get by not being able to see the colour of these but it would be 
nice if I could tailor them to different colours (like you can with maps 
colours).

Is this possible?


Not in this version of Coot, but the validation colour-scheme is being overhauled in the new version. Also, I've read that changing the material can help - so now green/good is shiny and red/bad is dull. At some stage I hope to replace shiny green balls with granny smiths and dull red balls with rotten tomatoes, but my 3d modelling skills are not so great. If you (or anyone who's a Brady Johnston fan) wishes to help out, you can create Blender blend files (or glTFs) for these.

Paul.

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