On May 17, 2005, at 5:05 PM, Robert Citek wrote:
Thanks, Phil and Rex. I'm exploring Bioconductor using Knoppix and
a persistent home folder, with the intention of having a portable
Bioconductor: insert CD, insert USB stick, boot machine. So far, R
seems to be working well. But Bioconductor is being a bit of a
pain. For my notes:
http://www.cwelug.org/cgi-bin/wiki.cgi?BioConductor
Two problems so far:
- error about not finding xml2-config
- R seg faults and ends
Problems resolved. Don't really know why they occurred, but they no
longer happen. So, Bioconductor is installed on Knoppix with a PKDI
(persistent Knoppix disk image). Instructions here:
http://www.cwelug.org/cgi-bin/wiki.cgi?BioConductor
I was even able to add in support for connecting to the MySQL
database. As soon as I get the bittorrent tracker running on the
cwelug machine again, I'll make the PKDI available for download. In
that way Bioconductor will be as easy to run as 1-2-3:
1) insert Knoppix CD
2) insert USB stick/drive with PKDI
3) turn on machine
Regards,
- Robert
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