See <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/21/>
------------------------------------------ [...truncated 4489 lines...] [INFO] catalog:null [INFO] catalogResolver:com.sun.org.apache.xml.internal.resolver.tools.CatalogResolver [INFO] generatePackage:cytoscape.bookmarks [INFO] generateDirectory:<http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/target/generated-sources/xjc> [INFO] readOnly:false [INFO] extension:false [INFO] strict:true [INFO] writeCode:true [INFO] verbose:true [INFO] debug:false [INFO] args:[] [INFO] forceRegenerate:true [INFO] removeOldOutput:false [INFO] otherDepends:null [INFO] episodeFile:<http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/target/generated-sources/xjc/META-INF/sun-jaxb.episode> [INFO] episode:true [INFO] classpathElements:[<http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/target/classes]> [INFO] plugins:null [INFO] episodes:null [INFO] xjcPlugins:null [INFO] episodes:null [INFO] specVersion:2.1 [INFO] schemaFiles (calculated):[<http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/src/main/resources/xsd/bookmarks.xsd]> [INFO] bindingFiles (calculated):[] [INFO] xjcPluginArtifacts (resolved):[] [INFO] xjcPluginFiles (resolved):[] [INFO] xjcPluginURLs (resolved):[] [INFO] episodeArtifacts (resolved):[] [INFO] episodeFiles (resolved):[] [INFO] The schemaLanguage setting was not defined, assuming 'AUTODETECT'. Using java.util.ServiceLoader [INFO] Parsing input schema(s)... [INFO] Compiling input schema(s)... [INFO] Writing output to [<http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/target/generated-sources/xjc].> [INFO] XJC writing: cytoscape/bookmarks/Attribute.java [INFO] XJC writing: cytoscape/bookmarks/Bookmarks.java [INFO] XJC writing: cytoscape/bookmarks/Category.java [INFO] XJC writing: cytoscape/bookmarks/DataSource.java [INFO] XJC writing: cytoscape/bookmarks/ObjectFactory.java [INFO] Finished execution. [INFO] [resources:resources] [INFO] Using 'UTF-8' encoding to copy filtered resources. [INFO] Copying 152 resources [INFO] Copying 0 resource [INFO] Copying 1 resource [INFO] Copying 0 resource [INFO] Copying 1 resource [INFO] [compiler:compile] [INFO] Compiling 32 source files to <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/target/classes> [INFO] [batik:rasterize {execution: default}] [INFO] Rasterizing 12 images from SVG to image/png [INFO] Setting property: classpath.resource.loader.class => 'org.codehaus.plexus.velocity.ContextClassLoaderResourceLoader'. [INFO] Setting property: velocimacro.messages.on => 'false'. [INFO] Setting property: resource.loader => 'classpath'. [INFO] Setting property: resource.manager.logwhenfound => 'false'. [INFO] ************************************************************** [INFO] Starting Jakarta Velocity v1.4 [INFO] RuntimeInstance initializing. [INFO] Default Properties File: org/apache/velocity/runtime/defaults/velocity.properties [INFO] Default ResourceManager initializing. (class org.apache.velocity.runtime.resource.ResourceManagerImpl) [INFO] Resource Loader Instantiated: org.codehaus.plexus.velocity.ContextClassLoaderResourceLoader [INFO] ClasspathResourceLoader : initialization starting. [INFO] ClasspathResourceLoader : initialization complete. [INFO] ResourceCache : initialized. (class org.apache.velocity.runtime.resource.ResourceCacheImpl) [INFO] Default ResourceManager initialization complete. [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Literal [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Macro [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Parse [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Include [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Foreach [INFO] Created: 20 parsers. [INFO] Velocimacro : initialization starting. [INFO] Velocimacro : adding VMs from VM library template : VM_global_library.vm [ERROR] ResourceManager : unable to find resource 'VM_global_library.vm' in any resource loader. [INFO] Velocimacro : error using VM library template VM_global_library.vm : org.apache.velocity.exception.ResourceNotFoundException: Unable to find resource 'VM_global_library.vm' [INFO] Velocimacro : VM library template macro registration complete. [INFO] Velocimacro : allowInline = true : VMs can be defined inline in templates [INFO] Velocimacro : allowInlineToOverride = false : VMs defined inline may NOT replace previous VM definitions [INFO] Velocimacro : allowInlineLocal = false : VMs defined inline will be global in scope if allowed. [INFO] Velocimacro : initialization complete. [INFO] Velocity successfully started. [INFO] [findbugs:findbugs] [INFO] Using maximum effort. [INFO] Using low threshold. [INFO] Using FindBugs Version: 1.3.2 [INFO] Using low threshold. [INFO] Using low threshold. [INFO] Using the xdoc format [INFO] Using maximum effort. [INFO] Using low threshold. [INFO] Using low threshold. [INFO] Debugging is Off [INFO] Using bug include filter <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/target/sonar/findbugs-include.xml> [INFO] No bug exclude filter. [INFO] Printing Errors [INFO] Printing Missing classes [INFO] Printing Source Roots [INFO] Cytoscape Application Executing org.apache.maven.plugins:maven-checkstyle-plugin:[checkstyle] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Application [INFO] task-segment: [org.apache.maven.plugins:maven-checkstyle-plugin:2.2:checkstyle] [INFO] ------------------------------------------------------------------------ [INFO] Setting property: classpath.resource.loader.class => 'org.codehaus.plexus.velocity.ContextClassLoaderResourceLoader'. [INFO] Setting property: velocimacro.messages.on => 'false'. [INFO] Setting property: resource.loader => 'classpath'. [INFO] Setting property: resource.manager.logwhenfound => 'false'. [INFO] ************************************************************** [INFO] Starting Jakarta Velocity v1.4 [INFO] RuntimeInstance initializing. [INFO] Default Properties File: org/apache/velocity/runtime/defaults/velocity.properties [INFO] Default ResourceManager initializing. (class org.apache.velocity.runtime.resource.ResourceManagerImpl) [INFO] Resource Loader Instantiated: org.codehaus.plexus.velocity.ContextClassLoaderResourceLoader [INFO] ClasspathResourceLoader : initialization starting. [INFO] ClasspathResourceLoader : initialization complete. [INFO] ResourceCache : initialized. (class org.apache.velocity.runtime.resource.ResourceCacheImpl) [INFO] Default ResourceManager initialization complete. [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Literal [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Macro [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Parse [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Include [INFO] Loaded System Directive: org.apache.velocity.runtime.directive.Foreach [INFO] Created: 20 parsers. [INFO] Velocimacro : initialization starting. [INFO] Velocimacro : adding VMs from VM library template : VM_global_library.vm [ERROR] ResourceManager : unable to find resource 'VM_global_library.vm' in any resource loader. [INFO] Velocimacro : error using VM library template VM_global_library.vm : org.apache.velocity.exception.ResourceNotFoundException: Unable to find resource 'VM_global_library.vm' [INFO] Velocimacro : VM library template macro registration complete. [INFO] Velocimacro : allowInline = true : VMs can be defined inline in templates [INFO] Velocimacro : allowInlineToOverride = false : VMs defined inline may NOT replace previous VM definitions [INFO] Velocimacro : allowInlineLocal = false : VMs defined inline will be global in scope if allowed. [INFO] Velocimacro : initialization complete. [INFO] Velocity successfully started. [INFO] [checkstyle:checkstyle] [INFO] There are 1544 checkstyle errors. [INFO] Cytoscape Application Executing org.apache.maven.plugins:maven-pmd-plugin:[pmd] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Application [INFO] task-segment: [org.apache.maven.plugins:maven-pmd-plugin:2.4:pmd] [INFO] ------------------------------------------------------------------------ [INFO] [pmd:pmd] [INFO] Cytoscape Application Executing org.codehaus.mojo:javancss-maven-plugin:[report] [INFO] ------------------------------------------------------------------------ [INFO] Building Cytoscape Application [INFO] task-segment: [org.codehaus.mojo:javancss-maven-plugin:2.0-beta-2:report] [INFO] ------------------------------------------------------------------------ [INFO] [javancss:report] ParseException in <http://cytoscape.wodaklab.org/hudson/job/Cytoscape_2.X_application/ws/trunk/src/main/java/cytoscape/visual/mappings/ObjectMapping.java> Last useful checkpoint: "cytoscape.visual.mappings.ObjectMapping" Encountered "public static final byte EDGE_MAPPING =" at line 72, column 5. Was expecting one of: "boolean" ... "byte" ... "char" ... "double" ... "float" ... "int" ... "long" ... "short" ... "@" ... "." ... "(" ... "public" "public" ... "public" "static" "public" ... "public" "static" "static" ... "public" "static" "protected" ... "public" "static" "private" ... "public" "static" "final" "public" ... "public" "static" "final" "static" ... "public" "static" "final" "protected" ... "public" "static" "final" "private" ... "public" "static" "final" "final" ... "public" "static" "final" "abstract" ... "public" "static" "final" "synchronized" ... "public" "static" "final" "native" ... "public" "static" "final" "transient" ... "public" "static" "final" "volatile" ... "public" "static" "final" "strictfp" ... "public" "static" "final" "@" ... "public" "static" "final" "enum" ... "public" "protected" ... "public" "private" ... "public" "static" "abstract" ... "public" "static" "final" "<" ... "public" "static" "final" "void" ... "public" "static" "final" "boolean" ... "public" "static" "final" "char" ... "public" "static" "final" "byte" "[" ... "public" "static" "final" <IDENTIFIER> ... "public" "static" "final" "byte" <IDENTIFIER> "(" ... <IDENTIFIER> ... [INFO] ------------------------------------------------------------------------ [ERROR] BUILD ERROR [INFO] ------------------------------------------------------------------------ [INFO] Can not execute Sonar Embedded error: Unable to execute mojo Encountered "public static final byte EDGE_MAPPING =" at line 72, column 5. Was expecting one of: "boolean" ... "byte" ... "char" ... "double" ... "float" ... "int" ... "long" ... "short" ... "@" ... "." ... "(" ... "public" "public" ... "public" "static" "public" ... "public" "static" "static" ... "public" "static" "protected" ... "public" "static" "private" ... "public" "static" "final" "public" ... "public" "static" "final" "static" ... "public" "static" "final" "protected" ... "public" "static" "final" "private" ... "public" "static" "final" "final" ... "public" "static" "final" "abstract" ... "public" "static" "final" "synchronized" ... "public" "static" "final" "native" ... "public" "static" "final" "transient" ... "public" "static" "final" "volatile" ... "public" "static" "final" "strictfp" ... "public" "static" "final" "@" ... "public" "static" "final" "enum" ... "public" "protected" ... "public" "private" ... "public" "static" "abstract" ... "public" "static" "final" "<" ... "public" "static" "final" "void" ... "public" "static" "final" "boolean" ... "public" "static" "final" "char" ... "public" "static" "final" "byte" "[" ... "public" "static" "final" <IDENTIFIER> ... "public" "static" "final" "byte" <IDENTIFIER> "(" ... <IDENTIFIER> ... [INFO] ------------------------------------------------------------------------ [INFO] For more information, run Maven with the -e switch [INFO] ------------------------------------------------------------------------ [INFO] Total time: 2 minutes 17 seconds [INFO] Finished at: Wed Aug 11 20:35:24 EDT 2010 [INFO] Final Memory: 105M/784M [INFO] ------------------------------------------------------------------------ -- You received this message because you are subscribed to the Google Groups "cytoscape-cvs" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/cytoscape-cvs?hl=en.
