This is an automated email from the git hooks/post-receive script. tille pushed a commit to branch master in repository r-bioc-annotationhub.
commit d7669ee2a33bd418a7f38448dcbe6abb992bf821 Merge: 53cc945 043bbce Author: Andreas Tille <[email protected]> Date: Fri Sep 22 13:33:22 2017 +0200 Updated version 2.8.1 from 'upstream/2.8.1' with Debian dir 64bc68403e5cf2890c3ecff854c37d8de3b4850a DESCRIPTION | 43 ++ NAMESPACE | 87 ++++ NEWS | 198 ++++++++ R/AllGenerics.R | 56 +++ R/AnnotationHub-class.R | 121 +++++ R/AnnotationHubOption.R | 52 +++ R/AnnotationHubResource-class.R | 275 ++++++++++++ R/BEDResource-class.R | 57 +++ R/EnsDbResource-class.R | 13 + R/EpigenomeResource-class.R | 144 ++++++ R/Hub-class.R | 466 +++++++++++++++++++ R/Hub-utils.R | 134 ++++++ R/ProteomicsResource-class.R | 34 ++ R/cache-utils.R | 114 +++++ R/db-utils.R | 174 +++++++ R/sql-utils.R | 361 +++++++++++++++ R/utilities.R | 159 +++++++ R/zzz.R | 31 ++ build/vignette.rds | Bin 0 -> 287 bytes inst/doc/AnnotationHub-HOWTO.R | 158 +++++++ inst/doc/AnnotationHub-HOWTO.Rmd | 367 +++++++++++++++ inst/doc/AnnotationHub-HOWTO.html | 724 ++++++++++++++++++++++++++++++ inst/doc/AnnotationHub.R | 71 +++ inst/doc/AnnotationHub.Rmd | 235 ++++++++++ inst/doc/AnnotationHub.html | 391 ++++++++++++++++ inst/scripts/shinyTest.R | 180 ++++++++ inst/scripts/test.R | 244 ++++++++++ inst/unitTests/test_AnnotationHub-class.R | 31 ++ inst/unitTests/test_cache.R | 17 + inst/unitTests/test_tidyGRanges.R | 32 ++ inst/unitTests/test_utilities.R | 3 + man/AnnotationHub-class.Rd | 402 +++++++++++++++++ man/AnnotationHub-package.Rd | 14 + man/AnnotationHubResource-class.Rd | 52 +++ man/getAnnotationHubOption.Rd | 72 +++ man/listResources.Rd | 71 +++ tests/runTests.R | 1 + vignettes/AnnotationHub-HOWTO.Rmd | 367 +++++++++++++++ vignettes/AnnotationHub.Rmd | 235 ++++++++++ vignettes/display.png | Bin 0 -> 170334 bytes 40 files changed, 6186 insertions(+) -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-bioc-annotationhub.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
