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commit 346bc22ed3a1c3777921d63a9e3b3766607ca6f2 Author: Andreas Tille <[email protected]> Date: Wed Oct 26 11:57:57 2016 +0000 * New upstream version * Convert to dh-r * Generic BioConductor homepage --- debian/changelog | 8 ++++++++ debian/control | 13 ++++++------- debian/copyright | 8 ++++---- debian/rules | 17 +++++++++++++---- 4 files changed, 31 insertions(+), 15 deletions(-) diff --git a/debian/changelog b/debian/changelog index bbeec20..305ae39 100644 --- a/debian/changelog +++ b/debian/changelog @@ -1,3 +1,11 @@ +r-bioc-multtest (2.30.0-1) unstable; urgency=medium + + * New upstream version + * Convert to dh-r + * Generic BioConductor homepage + + -- Andreas Tille <[email protected]> Wed, 26 Oct 2016 13:52:16 +0200 + r-bioc-multtest (2.26.0-1) unstable; urgency=medium * New upstream version diff --git a/debian/control b/debian/control index 05b05b4..4d1b495 100644 --- a/debian/control +++ b/debian/control @@ -4,24 +4,23 @@ Uploaders: Andreas Tille <[email protected]> Section: gnu-r Priority: optional Build-Depends: debhelper (>= 9), - cdbs, + dh-r, r-base-dev, r-bioc-biobase, r-cran-survival, r-cran-mass -Standards-Version: 3.9.6 -Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-multtest/trunk/ +Standards-Version: 3.9.8 +Vcs-Browser: https://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-bioc-multtest/trunk/ Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-bioc-multtest/trunk/ -Homepage: http://bioconductor.org/packages/release/bioc/html/multtest.html +Homepage: https://bioconductor.org/packages//multtest/ Package: r-bioc-multtest Architecture: any Depends: ${R:Depends}, ${misc:Depends}, ${shlibs:Depends}, - r-bioc-biobase, - r-cran-survival, - r-cran-mass +Recommends: ${R:Recommends} +Suggests: ${R:Suggests} Description: Bioconductor resampling-based multiple hypothesis testing Non-parametric bootstrap and permutation resampling-based multiple testing procedures (including empirical Bayes methods) for controlling diff --git a/debian/copyright b/debian/copyright index ba2be1e..d9c8e40 100644 --- a/debian/copyright +++ b/debian/copyright @@ -1,15 +1,15 @@ -Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ +Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: multtest Upstream-Contact: Katherine S. Pollard <[email protected]> -Source: http://bioconductor.org/packages/release/bioc/html/multtest.html +Source: https://bioconductor.org/packages//multtest/ Files: * -Copyright: © 2006-2015 Katherine S. Pollard, Houston N. Gilbert, Yongchao Ge, Sandra Taylor, Sandrine Dudoit +Copyright: © 2006-2016 Katherine S. Pollard, Houston N. Gilbert, Yongchao Ge, Sandra Taylor, Sandrine Dudoit License: LGPL-3+ Files: debian/* -Copyright: 2015 Andreas Tille <[email protected]> +Copyright: 2015-2016 Andreas Tille <[email protected]> License: LGPL-3+ License: LGPL-3+ diff --git a/debian/rules b/debian/rules index ee512f6..927a515 100755 --- a/debian/rules +++ b/debian/rules @@ -1,7 +1,16 @@ #!/usr/bin/make -f -debRreposname=bioc -include /usr/share/R/debian/r-cran.mk +debRreposname := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}' | sed 's/r-\([a-z]\+\)-.*/\1/') +awkString := "'/^(Package|Bundle):/ {print $$2 }'" +cranNameOrig := $(shell awk "$(awkString)" DESCRIPTION) +cranName := $(shell echo "$(cranNameOrig)" | tr A-Z a-z) +package := r-$(debRreposname)-$(cranName) +debRdir := usr/lib/R/site-library +debRlib := $(CURDIR)/debian/$(package)/$(debRdir) -install/$(package):: - chmod 644 debian/$(package)/usr/lib/R/site-library/$(cranNameOrig)/otherDocs/*.Rnw +%: + dh $@ --buildsystem R + +override_dh_fixperms: + dh_fixperms + chmod -x $(debRlib)/$(cranNameOrig)/otherDocs/*.Rnw -- Alioth's /usr/local/bin/git-commit-notice on /srv/git.debian.org/git/debian-med/r-bioc-multtest.git _______________________________________________ debian-med-commit mailing list [email protected] http://lists.alioth.debian.org/cgi-bin/mailman/listinfo/debian-med-commit
