Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
66e12bd3 by Andreas Tille at 2020-07-19T13:44:23+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,4 +1,4 @@
-Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
+Last-Update: Sun, 19 Jul 2020 13:42:04 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
@@ -6,47 +6,47 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
orthanc | 89 | {covid-19,imaging,practice}
|
gdcm | 44 | {imaging-dev}
|
orthanc-wsi | 43 |
{his,practice,covid-19,laboratory,imaging,oncology} |
- htsjdk | 31 | {bio-dev}
|
- dcm2niix | 21 | {imaging}
|
- dicom3tools | 21 | {imaging}
|
- dicomscope | 18 | {imaging}
|
- gnumed-server | 17 | {practice,covid-19}
|
- ngs-sdk | 15 | {bio-dev}
|
- gdcm | 14 | {covid-19,imaging}
|
+ htsjdk | 30 | {bio-dev}
|
+ dcm2niix | 22 | {imaging}
|
+ dicom3tools | 22 | {imaging}
|
+ dicomscope | 20 | {imaging}
|
+ gnumed-server | 18 | {practice,covid-19}
|
+ gdcm | 15 | {covid-19,imaging}
|
+ ngs-sdk | 14 | {bio-dev}
|
gdcm | 13 | {imaging-dev}
|
- insighttoolkit4 | 12 | {imaging-dev}
|
+ insighttoolkit4 | 13 | {imaging-dev}
|
invesalius | 11 | {imaging}
|
jebl2 | 10 | {bio-dev}
|
+ minc-tools | 10 | {imaging}
|
ngs-sdk | 10 | {bio-dev}
|
pixelmed | 10 | {imaging}
|
adun.app | 9 | {bio}
|
lagan | 9 | {bio}
|
- minc-tools | 9 | {imaging}
|
+ melting | 9 | {bio,cloud}
|
psychopy | 9 | {psychology}
|
- libdivsufsort | 8 | {bio-dev}
|
- melting | 8 | {bio,cloud}
|
+ vtk-dicom | 9 | {imaging}
|
orthanc-webviewer | 8 | {imaging}
|
- vtk-dicom | 8 | {imaging}
|
dicompyler | 7 | {oncology}
|
+ libdivsufsort | 7 | {bio-dev}
|
libminc | 7 | {imaging-dev}
|
openslide | 7 | {imaging}
|
orthanc-dicomweb | 7 | {imaging,covid-19}
|
plastimatch | 7 | {imaging}
|
treeview | 7 | {bio-phylogeny,bio}
|
+ bart-view | 6 | {imaging}
|
biojava-live | 6 | {bio-dev}
|
biomaj3-cli | 6 | {cloud}
|
biosig4c++ | 6 | {physics,imaging}
|
ea-utils | 6 | {bio}
|
+ king | 6 | {imaging,typesetting}
|
obitools | 6 | {bio}
|
orthanc-mysql | 6 | {imaging}
|
paraclu | 6 | {cloud,bio}
|
stacks | 6 | {bio}
|
anfo | 5 | {bio,cloud}
|
- bart-view | 5 | {imaging}
|
biomaj3-daemon | 5 | {bio}
|
fastlink | 5 | {cloud,bio}
|
getdata | 5 | {bio}
|
- king | 5 | {imaging,typesetting}
|
librg-utils-perl | 5 | {bio}
|
mlv-smile | 5 | {bio,cloud}
|
orthanc-postgresql | 5 | {imaging}
|
@@ -61,6 +61,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
gatb-core | 4 | {bio}
|
king-probe | 4 | {bio}
|
mauve-aligner | 4 | {bio}
|
+ mhap | 4 | {bio-ngs,bio}
|
mipe | 4 | {cloud,bio}
|
mrs | 4 | {bio}
|
ncbi-seg | 4 | {bio}
|
@@ -72,6 +73,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
transtermhp | 4 | {bio}
|
alter-sequence-alignment | 3 | {bio}
|
bandage | 3 | {bio}
|
+ brig | 3 | {bio}
|
busco | 3 | {covid-19,bio}
|
daligner | 3 | {bio-ngs,bio}
|
ecopcr | 3 | {bio}
|
@@ -84,7 +86,6 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
libncl | 3 | {bio}
|
librdp-taxonomy-tree-java | 3 | {bio-dev}
|
libsbml | 3 | {bio-dev}
|
- mhap | 3 | {bio-ngs,bio}
|
microbegps | 3 | {bio}
|
multiqc | 3 | {bio,covid-19}
|
openslide | 3 | {imaging-dev}
|
@@ -114,7 +115,6 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
bio-tradis | 2 | {bio-dev,bio}
|
bitseq | 2 | {bio}
|
blasr | 2 | {bio,bio-ngs}
|
- brig | 2 | {bio}
|
canu | 2 | {bio}
|
centrifuge | 2 | {bio,covid-19}
|
clonalframeml | 2 | {bio,covid-19}
|
@@ -136,7 +136,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
maffilter | 2 | {bio}
|
metaphlan2 | 2 | {bio}
|
murasaki | 2 | {bio}
|
- ncbi-vdb | 2 | {bio-dev}
|
+ ngs-sdk | 2 | {bio-dev}
|
patman | 2 | {bio}
|
pbdagcon | 2 | {bio}
|
phast | 2 | {bio}
|
@@ -173,16 +173,13 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
cat-bat | 1 | {bio,covid-19}
|
ctn | 1 | {imaging-dev}
|
embassy-phylip | 1 | {bio,cloud}
|
- gatb-core | 1 | {bio-dev}
|
- htscodecs | 1 | {covid-19,bio-dev}
|
libdisorder | 1 | {bio-dev}
|
libhmsbeagle | 1 | {bio-dev}
|
libvistaio | 1 | {imaging-dev}
|
logol | 1 | {bio}
|
- ngs-sdk | 1 | {bio-dev}
|
+ ncbi-vdb | 1 | {bio-dev}
|
opensurgsim | 1 | {imaging-dev}
|
papyrus | 1 | {imaging-dev}
|
- pbcopper | 1 | {bio-dev}
|
phipack | 1 | {bio}
|
plasmidseeker | 1 | {bio}
|
q2templates | 1 | {bio}
|
@@ -206,6 +203,8 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
emboss-explorer | 0 | {bio}
|
emmax | 0 | {bio}
|
fis-gtm | 0 | {his}
|
+ gatb-core | 0 | {bio-dev}
|
+ htscodecs | 0 | {covid-19,bio-dev}
|
kma | 0 | {bio}
|
kmerresistance | 0 | {bio}
|
libbigwig | 0 | {bio-dev}
|
@@ -245,6 +244,7 @@ Last-Update: Sun, 19 Jul 2020 01:42:03 +0000
opencfu | 0 | {laboratory}
|
orthanc-imagej | 0 | {imaging}
|
parallel-fastq-dump | 0 | {covid-19}
|
+ pbcopper | 0 | {bio-dev}
|
pbseqlib | 0 | {bio-dev}
|
pilercr | 0 | {bio}
|
quicktree | 0 | {bio,covid-19,bio-phylogeny}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/66e12bd3ae54bcde57d4b1bc701abeca5ddecf69
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/66e12bd3ae54bcde57d4b1bc701abeca5ddecf69
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