Andreas Tille pushed to branch master at Debian Med / pique
Commits: 8a0c2b34 by Andreas Tille at 2020-07-20T12:05:03+02:00 typo - - - - - 31046b15 by Andreas Tille at 2020-07-20T12:08:58+02:00 Fix copyright - - - - - 701abe3a by Andreas Tille at 2020-07-20T12:10:05+02:00 Fix permissions - - - - - 3 changed files: - debian/control - debian/copyright - debian/rules Changes: ===================================== debian/control ===================================== @@ -29,7 +29,7 @@ Description: software pipeline for performing genome wide association studies wrappers that allow users to perform GWAS using the popular program EMMAX (Kang et al., 2010) without the need to be familiar with all of the software tools used to generate the required EMMAX input files. - PIQUE will also perform a number of of quality control steps prior to + PIQUE will also perform a number of quality control steps prior to running EMMAX, ensuring that the various input data files are in the correct format. PIQUE proceeds in two main stages although there are multiple entry and exit points from which the pipeline can be run. The ===================================== debian/copyright ===================================== @@ -4,9 +4,25 @@ Upstream-Contact: Tony Travis <[email protected]> Source: https://github.com/tony-travis/PIQUE/releases Files: * -Copyright: 20xx-20yy <upstream> -License: <license> +Copyright: 2016-2018 A. J. Travis and A. Douglas +License: GPL-3.0 Files: debian/* -Copyright: 2019 Andreas Tille <[email protected]> -License: <license> +Copyright: 2019-2020 Andreas Tille <[email protected]> +License: GPL-3.0 + +License: GPL-3.0 + This program is free software: you can redistribute it and/or modify + it under the terms of the GNU General Public License as published by + the Free Software Foundation, either version 3 of the License. + . + This package is distributed in the hope that it will be useful, + but WITHOUT ANY WARRANTY; without even the implied warranty of + MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the + GNU General Public License for more details. + . + You should have received a copy of the GNU General Public License + along with this program. If not, see <https://www.gnu.org/licenses/>. + . + On Debian systems, the complete text of the GNU General Public + License version 3 can be found in "/usr/share/common-licenses/GPL-3". ===================================== debian/rules ===================================== @@ -4,15 +4,6 @@ export LC_ALL=C.UTF-8 include /usr/share/dpkg/default.mk -# this provides: -# DEB_SOURCE: the source package name -# DEB_VERSION: the full version of the package (epoch + upstream vers. + revision) -# DEB_VERSION_EPOCH_UPSTREAM: the package's version without the Debian revision -# DEB_VERSION_UPSTREAM_REVISION: the package's version without the Debian epoch -# DEB_VERSION_UPSTREAM: the package's upstream version -# DEB_DISTRIBUTION: the distribution(s) listed in the current entry of debian/changelog -# SOURCE_DATE_EPOCH: the source release date as seconds since the epoch, as -# specified by <https://reproducible-builds.org/specs/source-date-epoch/> # for hardening you might like to uncomment this: # export DEB_BUILD_MAINT_OPTIONS=hardening=+all @@ -31,3 +22,7 @@ override_dh_auto_install: #ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) # do_stuff_for_testing #endif + +override_dh_fixperms: + dh_fixperms + find debian -name "*.R" -exec chmod -x \{\} \; View it on GitLab: https://salsa.debian.org/med-team/pique/-/compare/35f20be9ac31f0a9f1fed03916fc627315610eee...701abe3a36c77e2a9b513b5817cb33f360f01f8d -- View it on GitLab: https://salsa.debian.org/med-team/pique/-/compare/35f20be9ac31f0a9f1fed03916fc627315610eee...701abe3a36c77e2a9b513b5817cb33f360f01f8d You're receiving this email because of your account on salsa.debian.org.
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