Andreas Tille pushed to branch master at Debian Med / dawg
Commits: c49bdf23 by Andreas Tille at 2020-11-16T10:18:13+01:00 routine-update: Standards-Version: 4.5.0 - - - - - d9c2df6e by Andreas Tille at 2020-11-16T10:18:13+01:00 routine-update: debhelper-compat 13 - - - - - 726f16f1 by Andreas Tille at 2020-11-16T10:19:57+01:00 routine-update: Respect DEB_BUILD_OPTIONS in override_dh_auto_test target - - - - - 3a222589 by Andreas Tille at 2020-11-16T10:19:58+01:00 routine-update: autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g - - - - - efc87c65 by Andreas Tille at 2020-11-16T10:19:58+01:00 routine-update: Add salsa-ci file - - - - - 6294d673 by Andreas Tille at 2020-11-16T10:19:58+01:00 routine-update: Rules-Requires-Root: no - - - - - 80785705 by Andreas Tille at 2020-11-16T10:20:01+01:00 Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, Repository-Browse. Changes-By: lintian-brush Fixes: lintian: upstream-metadata-missing-bug-tracking See-also: https://lintian.debian.org/tags/upstream-metadata-missing-bug-tracking.html Fixes: lintian: upstream-metadata-missing-repository See-also: https://lintian.debian.org/tags/upstream-metadata-missing-repository.html - - - - - f677b497 by Andreas Tille at 2020-11-16T10:20:54+01:00 routine-update: Ready to upload to unstable - - - - - 7 changed files: - debian/changelog - − debian/compat - debian/control - debian/rules - + debian/salsa-ci.yml - debian/tests/run-unit-test - debian/upstream/metadata Changes: ===================================== debian/changelog ===================================== @@ -1,3 +1,18 @@ +dawg (1.2-3) unstable; urgency=medium + + * Team upload. + * Standards-Version: 4.5.0 (routine-update) + * debhelper-compat 13 (routine-update) + * Respect DEB_BUILD_OPTIONS in override_dh_auto_test target (routine- + update) + * autopkgtest: s/ADTTMP/AUTOPKGTEST_TMP/g (routine-update) + * Add salsa-ci file (routine-update) + * Rules-Requires-Root: no (routine-update) + * Set upstream metadata fields: Bug-Database, Bug-Submit, Repository, + Repository-Browse. + + -- Andreas Tille <[email protected]> Mon, 16 Nov 2020 10:20:01 +0100 + dawg (1.2-2) unstable; urgency=medium [ Andreas Tille ] ===================================== debian/compat deleted ===================================== @@ -1 +0,0 @@ -11 ===================================== debian/control ===================================== @@ -3,14 +3,15 @@ Maintainer: Debian Med Packaging Team <[email protected]. Uploaders: Kevin Murray <[email protected]> Section: science Priority: optional -Build-Depends: debhelper (>= 11~), +Build-Depends: debhelper-compat (= 13), cmake, bison, flex -Standards-Version: 4.1.5 +Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/dawg Vcs-Git: https://salsa.debian.org/med-team/dawg.git Homepage: https://github.com/reedacartwright/dawg +Rules-Requires-Root: no Package: dawg Architecture: any ===================================== debian/rules ===================================== @@ -22,7 +22,7 @@ override_dh_fixperms: chmod -x debian/$(DEB_SOURCE)/usr/share/doc/dawg/examples/* override_dh_auto_test: - # FIXME: This test fails - but let the build pass anyway for the moment ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) + # FIXME: This test fails - but let the build pass anyway for the moment cd tests && PATH=$$PATH:$(BINDIR) sh test0.sh || true endif ===================================== debian/salsa-ci.yml ===================================== @@ -0,0 +1,4 @@ +--- +include: + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/salsa-ci.yml + - https://salsa.debian.org/salsa-ci-team/pipeline/raw/master/pipeline-jobs.yml ===================================== debian/tests/run-unit-test ===================================== @@ -2,12 +2,12 @@ pkg=dawg -if [ "$ADTTMP" = "" ] ; then - ADTTMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) - trap "rm -rf $ADTTMP" 0 INT QUIT ABRT PIPE TERM +if [ "$AUTOPKGTEST_TMP" = "" ] ; then + AUTOPKGTEST_TMP=$(mktemp -d /tmp/${pkg}-test.XXXXXX) + trap "rm -rf $AUTOPKGTEST_TMP" 0 INT QUIT ABRT PIPE TERM fi -cd $ADTTMP +cd $AUTOPKGTEST_TMP cp -a /usr/share/doc/${pkg}/tests/* . find . -type f -name "*.gz" -exec gunzip \{\} \; ===================================== debian/upstream/metadata ===================================== @@ -1,3 +1,5 @@ +Bug-Database: https://github.com/reedacartwright/dawg/issues +Bug-Submit: https://github.com/reedacartwright/dawg/issues/new Reference: Author: Reed A. Cartwright Title: "DNA assembly with gaps (Dawg): simulating sequence evolution" @@ -21,3 +23,5 @@ Registry: Entry: NA - Name: conda:bioconda Entry: dawg +Repository: https://github.com/reedacartwright/dawg.git +Repository-Browse: https://github.com/reedacartwright/dawg View it on GitLab: https://salsa.debian.org/med-team/dawg/-/compare/c8f83910dade6a17e99e9c42dc0960bb11167cae...f677b497cf96fae679641e6fbc1fcaf3264849cf -- View it on GitLab: https://salsa.debian.org/med-team/dawg/-/compare/c8f83910dade6a17e99e9c42dc0960bb11167cae...f677b497cf96fae679641e6fbc1fcaf3264849cf You're receiving this email because of your account on salsa.debian.org.
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