Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
c0d08ce7 by Andreas Tille at 2021-01-23T13:46:15+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,26 +1,26 @@
-Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
+Last-Update: Sat, 23 Jan 2021 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 185 | {imaging,covid-19}
|
+ dcmtk | 184 | {imaging,covid-19}
|
orthanc | 98 | {covid-19,imaging,practice}
|
orthanc-wsi | 53 |
{imaging,his,laboratory,oncology,covid-19,practice} |
gdcm | 35 | {imaging-dev}
|
amide | 28 | {imaging}
|
dicom3tools | 28 | {imaging}
|
htsjdk | 25 | {bio-dev}
|
- dicomscope | 24 | {imaging}
|
- dcm2niix | 19 | {imaging}
|
+ dicomscope | 23 | {imaging}
|
+ dcm2niix | 20 | {imaging}
|
nifticlib | 18 | {imaging}
|
gdcm | 17 | {covid-19,imaging}
|
odin | 16 | {imaging,imaging-dev}
|
gdcm | 14 | {imaging-dev}
|
gnumed-server | 14 | {covid-19,practice}
|
invesalius | 14 | {imaging}
|
+ ngs-sdk | 14 | {bio-dev}
|
+ plastimatch | 14 | {imaging}
|
dicomnifti | 13 | {imaging}
|
minc-tools | 13 | {imaging}
|
- ngs-sdk | 13 | {bio-dev}
|
- plastimatch | 13 | {imaging}
|
insighttoolkit4 | 11 | {imaging-dev}
|
king | 11 | {imaging,typesetting}
|
pixelmed | 11 | {imaging}
|
@@ -28,18 +28,19 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
vtk-dicom | 10 | {imaging}
|
openslide | 9 | {imaging}
|
adun.app | 8 | {bio}
|
- biojava-live | 8 | {bio-dev}
|
ngs-sdk | 8 | {bio-dev}
|
nifti2dicom | 8 | {imaging}
|
orthanc-webviewer | 8 | {imaging}
|
- bio-tradis | 7 | {bio-dev,bio}
|
- fastlink | 7 | {cloud,bio}
|
+ biojava-live | 7 | {bio-dev}
|
jebl2 | 7 | {bio-dev}
|
- librg-utils-perl | 7 | {bio}
|
melting | 7 | {cloud,bio}
|
rdp-alignment | 7 | {bio}
|
+ bamkit | 6 | {covid-19,bio}
|
+ bio-tradis | 6 | {bio-dev,bio}
|
+ fastlink | 6 | {cloud,bio}
|
libminc | 6 | {imaging-dev}
|
libncl | 6 | {bio}
|
+ librg-utils-perl | 6 | {bio}
|
mauve-aligner | 6 | {bio}
|
mipe | 6 | {cloud,bio}
|
nifti2dicom | 6 | {imaging}
|
@@ -48,8 +49,8 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
prime-phylo | 6 | {bio,cloud}
|
runcircos-gui | 6 | {bio}
|
saint | 6 | {bio}
|
- bamkit | 5 | {covid-19,bio}
|
biomaj3-cli | 5 | {cloud}
|
+ ea-utils | 5 | {bio}
|
ecopcr | 5 | {bio}
|
embassy-domainatrix | 5 | {bio,cloud}
|
embassy-domsearch | 5 | {cloud,bio}
|
@@ -58,12 +59,15 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
lagan | 5 | {bio}
|
lamarc | 5 | {bio}
|
librdp-taxonomy-tree-java | 5 | {bio-dev}
|
+ ngs-sdk | 5 | {bio-dev}
|
orthanc-dicomweb | 5 | {imaging,covid-19}
|
orthanc-mysql | 5 | {imaging}
|
orthanc-postgresql | 5 | {imaging}
|
phast | 5 | {bio}
|
pymia | 5 | {imaging-dev}
|
+ rambo-k | 5 | {bio}
|
rdp-classifier | 5 | {bio}
|
+ seqsero | 5 | {bio}
|
spread-phy | 5 | {bio-phylogeny,bio}
|
staden | 5 | {bio}
|
tracetuner | 5 | {bio}
|
@@ -74,13 +78,11 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
bitseq | 4 | {bio}
|
brig | 4 | {bio}
|
clonalorigin | 4 | {bio}
|
- ea-utils | 4 | {bio}
|
embassy-domalign | 4 | {cloud,bio}
|
libdivsufsort | 4 | {bio-dev}
|
libpal-java | 4 | {bio-dev}
|
libsbml | 4 | {bio-dev}
|
multiqc | 4 | {covid-19,bio}
|
- ngs-sdk | 4 | {bio-dev}
|
paraclu | 4 | {bio,cloud}
|
pbdagcon | 4 | {bio}
|
phyutility | 4 | {bio,cloud}
|
@@ -90,9 +92,7 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
pscan-chip | 4 | {bio}
|
qcumber | 4 | {bio}
|
quorum | 4 | {bio}
|
- rambo-k | 4 | {bio}
|
samblaster | 4 | {bio,covid-19}
|
- seqsero | 4 | {bio}
|
sibsim4 | 4 | {bio,cloud}
|
arden | 3 | {cloud,bio}
|
assemblytics | 3 | {bio}
|
@@ -126,7 +126,6 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
fsm-lite | 2 | {bio}
|
gatb-core | 2 | {bio}
|
hinge | 2 | {bio}
|
- libbio-mage-utils-perl | 2 | {bio-dev}
|
libmuscle | 2 | {bio-dev}
|
logol | 2 | {bio}
|
metaphlan2 | 2 | {bio}
|
@@ -146,6 +145,7 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
cat-bat | 1 | {bio,covid-19}
|
gatb-core | 1 | {bio-dev}
|
gifticlib | 1 | {imaging-dev}
|
+ libbio-mage-utils-perl | 1 | {bio-dev}
|
libbpp-core | 1 | {bio-dev}
|
libbpp-phyl | 1 | {bio-dev}
|
libbpp-phyl-omics | 1 | {bio-dev}
|
@@ -169,6 +169,7 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
opensurgsim | 1 | {imaging-dev}
|
papyrus | 1 | {imaging-dev}
|
pbseqlib | 1 | {bio-dev}
|
+ pilercr | 1 | {bio}
|
plasmidid | 1 | {covid-19,bio}
|
segemehl | 1 | {bio}
|
seq-gen | 1 | {bio}
|
@@ -215,7 +216,6 @@ Last-Update: Sat, 23 Jan 2021 01:42:04 +0000
pbcopper | 0 | {bio-dev}
|
pbseqlib | 0 | {bio-dev}
|
pigx-rnaseq | 0 | {bio,covid-19}
|
- pilercr | 0 | {bio}
|
pique | 0 | {bio}
|
pplacer | 0 | {bio-phylogeny,bio,covid-19}
|
python-bcbio-gff | 0 | {bio-dev}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c0d08ce77534fcdfa47fbed883f7cbbb29fbba1b
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/c0d08ce77534fcdfa47fbed883f7cbbb29fbba1b
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