Andreas Tille pushed to branch master at Debian Med / community / helper-scripts
Commits:
1b653abc by Andreas Tille at 2021-04-27T13:42:20+00:00
automatic update
- - - - -
2 changed files:
- debian-med-tests.txt
- outdated_med-packages.txt
Changes:
=====================================
debian-med-tests.txt
=====================================
@@ -1,32 +1,32 @@
-Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
+Last-Update: Tue, 27 Apr 2021 13:42:03 +0000
Source | Vote | Tasks
| Tags
-------------------------------+--------+-----------------------------------------------------+----------------------------------------------------------------------
- dcmtk | 180 | {covid-19,imaging}
|
- orthanc | 94 | {covid-19,practice,imaging}
|
- orthanc-wsi | 50 |
{laboratory,imaging,his,oncology,covid-19,practice} |
- gdcm | 48 | {imaging-dev}
|
- openslide | 41 | {imaging}
|
- amide | 35 | {imaging}
|
- nipype | 34 | {imaging,imaging-dev}
|
- dicom3tools | 31 | {imaging}
|
- dicomscope | 27 | {imaging}
|
- htsjdk | 24 | {bio-dev}
|
- dcm2niix | 21 | {imaging}
|
- gdcm | 16 | {covid-19,imaging}
|
- odin | 16 | {imaging-dev,imaging}
|
+ dcmtk | 178 | {covid-19,imaging}
|
+ orthanc | 92 | {covid-19,practice,imaging}
|
+ orthanc-wsi | 49 |
{laboratory,imaging,his,oncology,covid-19,practice} |
+ gdcm | 47 | {imaging-dev}
|
+ openslide | 43 | {imaging}
|
+ amide | 37 | {imaging}
|
+ nipype | 35 | {imaging,imaging-dev}
|
+ dicom3tools | 32 | {imaging}
|
+ dicomscope | 28 | {imaging}
|
+ htsjdk | 25 | {bio-dev}
|
+ dcm2niix | 22 | {imaging}
|
+ gdcm | 17 | {covid-19,imaging}
|
+ odin | 17 | {imaging-dev,imaging}
|
gdcm | 15 | {imaging-dev}
|
- minc-tools | 14 | {imaging}
|
+ minc-tools | 15 | {imaging}
|
+ pixelmed | 13 | {imaging}
|
dicomnifti | 12 | {imaging}
|
gnumed-server | 12 | {practice,covid-19}
|
invesalius | 12 | {imaging}
|
- orthanc-webviewer | 12 | {imaging}
|
- pixelmed | 12 | {imaging}
|
+ vtk-dicom | 12 | {imaging}
|
adun.app | 11 | {bio}
|
+ insighttoolkit4 | 11 | {imaging-dev}
|
+ mia | 11 | {imaging}
|
nifticlib | 11 | {imaging}
|
- vtk-dicom | 11 | {imaging}
|
- insighttoolkit4 | 10 | {imaging-dev}
|
- mia | 10 | {imaging}
|
+ orthanc-webviewer | 11 | {imaging}
|
ngs-sdk | 9 | {bio-dev}
|
nifti2dicom | 9 | {imaging}
|
plastimatch | 9 | {imaging}
|
@@ -36,28 +36,25 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
ngs-sdk | 7 | {bio-dev}
|
treeview | 7 | {bio,bio-phylogeny}
|
salmid | 6 | {bio}
|
+ bamkit | 5 | {covid-19,bio}
|
blasr | 5 | {bio-ngs,bio}
|
+ jebl2 | 5 | {bio-dev}
|
lagan | 5 | {bio}
|
librg-utils-perl | 5 | {bio}
|
melting | 5 | {cloud,bio}
|
ngs-sdk | 5 | {bio-dev}
|
- obitools | 5 | {bio}
|
orthanc-dicomweb | 5 | {covid-19,imaging}
|
- bamkit | 4 | {covid-19,bio}
|
+ rambo-k | 5 | {bio}
|
bart-view | 4 | {imaging}
|
biomaj3-cli | 4 | {cloud}
|
busco | 4 | {covid-19,bio}
|
ea-utils | 4 | {bio}
|
embassy-domainatrix | 4 | {bio,cloud}
|
- jebl2 | 4 | {bio-dev}
|
king | 4 | {imaging,typesetting}
|
- libncl | 4 | {bio}
|
nifticlib | 4 | {imaging-dev}
|
- orthanc-mysql | 4 | {imaging}
|
+ obitools | 4 | {bio}
|
pymia | 4 | {imaging-dev}
|
- rambo-k | 4 | {bio}
|
salmon | 4 | {bio,covid-19}
|
- staden | 4 | {bio}
|
beast-mcmc | 3 | {bio-phylogeny,bio}
|
biojava-live | 3 | {bio-dev}
|
bitseq | 3 | {bio}
|
@@ -68,12 +65,15 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
getdata | 3 | {bio}
|
jellyfish1 | 3 | {bio}
|
lamarc | 3 | {bio}
|
- opencfu | 3 | {laboratory}
|
+ libncl | 3 | {bio}
|
openslide | 3 | {imaging-dev}
|
+ orthanc-mysql | 3 | {imaging}
|
orthanc-postgresql | 3 | {imaging}
|
oscar | 3 | {data,practice,tools}
|
pbdagcon | 3 | {bio}
|
phast | 3 | {bio}
|
+ plasmidid | 3 | {covid-19,bio}
|
+ staden | 3 | {bio}
|
tracetuner | 3 | {bio}
|
anfo | 2 | {bio,cloud}
|
arden | 2 | {cloud,bio}
|
@@ -86,11 +86,12 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
libpal-java | 2 | {bio-dev}
|
libsbml | 2 | {bio-dev}
|
microbegps | 2 | {bio}
|
+ opencfu | 2 | {laboratory}
|
papyrus | 2 | {imaging-dev}
|
perm | 2 | {bio,cloud}
|
phyutility | 2 | {cloud,bio}
|
piler | 2 | {bio}
|
- plasmidid | 2 | {covid-19,bio}
|
+ qcumber | 2 | {bio}
|
rtax | 2 | {bio,cloud}
|
saint | 2 | {bio}
|
samtools-legacy | 2 | {bio-dev}
|
@@ -118,6 +119,7 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
ipig | 1 | {bio}
|
jmodeltest | 1 | {bio-phylogeny,bio}
|
libchado-perl | 1 | {bio-dev}
|
+ libmuscle | 1 | {bio-dev}
|
librdp-taxonomy-tree-java | 1 | {bio-dev}
|
libvistaio | 1 | {imaging-dev}
|
logol | 1 | {bio}
|
@@ -130,7 +132,6 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
prime-phylo | 1 | {cloud,bio}
|
proalign | 1 | {bio,bio-phylogeny}
|
python-wdlparse | 1 | {bio-dev}
|
- qcumber | 1 | {bio}
|
quorum | 1 | {bio}
|
rdp-alignment | 1 | {bio}
|
rdp-classifier | 1 | {bio}
|
@@ -144,6 +145,7 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
spaced | 1 | {bio}
|
suitename | 1 | {bio}
|
tvc | 1 | {bio}
|
+ varna | 1 | {bio}
|
vienna-rna | 1 | {bio,covid-19}
|
vtk-dicom | 1 | {imaging-dev}
|
yaha | 1 | {bio}
|
@@ -185,7 +187,6 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
libmaus2 | 0 | {covid-19,bio-dev}
|
libmems | 0 | {bio-dev}
|
libmialm | 0 | {imaging-dev}
|
- libmuscle | 0 | {bio-dev}
|
libncl | 0 | {bio-dev}
|
libpsortb | 0 | {bio-dev}
|
libqes | 0 | {bio-dev}
|
@@ -233,7 +234,6 @@ Last-Update: Tue, 27 Apr 2021 01:42:03 +0000
thesias | 0 | {bio,covid-19}
|
tophat-recondition | 0 | {covid-19,bio}
|
trace2dbest | 0 | {bio}
|
- varna | 0 | {bio}
|
varscan | 0 | {covid-19,bio}
|
xdffileio | 0 | {imaging-dev}
|
yanagiba | 0 | {bio,covid-19}
|
=====================================
outdated_med-packages.txt
=====================================
The diff for this file was not included because it is too large.
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1b653abcd8c75766faa6a88fc2cd045beae838f4
--
View it on GitLab:
https://salsa.debian.org/med-team/community/helper-scripts/-/commit/1b653abcd8c75766faa6a88fc2cd045beae838f4
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