debian-med

Messages by Date

2023/01/29 Re: Thanks for helping sra-sdk 3 migrate! Andreas Tille
2023/01/29 Re: Thanks for helping sra-sdk 3 migrate! Paul Gevers
2023/01/29 Remaining numpy 1.24 issues on 32bit architectures Andreas Tille
2023/01/29 Re: Help needed to finalise the oneTBB migration of flexbar Andreas Tille
2023/01/28 Re: Help needed to finalise the oneTBB migration of flexbar Andreas Tille
2023/01/27 Re: Help needed to finalise the oneTBB migration of flexbar Étienne Mollier
2023/01/26 Re: Thanks for helping sra-sdk 3 migrate! Aaron M. Ucko
2023/01/26 Re: Thanks for helping sra-sdk 3 migrate! Paul Gevers
2023/01/26 Thanks for helping sra-sdk 3 migrate! Aaron M. Ucko
2023/01/24 Re: Help needed to finalise the oneTBB migration of flexbar Tony Travis
2023/01/24 Help needed to finalise the oneTBB migration of flexbar Andreas Tille
2023/01/22 Re: Finishing ncbi-vdb and sra-sdk Andreas Tille
2023/01/22 Re: Finishing ncbi-vdb and sra-sdk Aaron M. Ucko
2023/01/21 pplacer status (Was: Re: [RFH] aeonbits-owner and capsule-maven-nextflow) Pierre Gruet
2023/01/20 Re: Help needed to upgrade ncbi-igblast Aaron M. Ucko
2023/01/20 Help needed for bioperl-run autopkgtest error Andreas Tille
2023/01/19 Re: Help needed to upgrade ncbi-igblast Aaron M. Ucko
2023/01/19 Re: Help needed to upgrade ncbi-igblast Nilesh Patra
2023/01/19 Re: Help needed to upgrade ncbi-igblast Aaron M. Ucko
2023/01/19 Help needed to upgrade ncbi-igblast Andreas Tille
2023/01/19 Re: Uscan error for orthanc-wsi Andreas Tille
2023/01/19 Re: Uscan error for orthanc-wsi Sébastien Jodogne
2023/01/19 Re: Uscan error for orthanc-wsi Andreas Tille
2023/01/19 Re: Uscan error for orthanc-wsi Sébastien Jodogne
2023/01/19 Uscan error for orthanc-wsi Andreas Tille
2023/01/18 Re: Sprint can start Friday evening - who would like to join Andreas Tille
2023/01/18 Re: Sprint can start Friday evening - who would like to join Pierre Gruet
2023/01/18 Re: Sprint can start Friday evening - who would like to join Andreas Tille
2023/01/17 Re: Sprint can start Friday evening - who would like to join Andreas Tille
2023/01/17 Re: Sprint can start Friday evening - who would like to join Sascha Steinbiss
2023/01/17 Re: Sprint can start Friday evening - who would like to join Andreas Tille
2023/01/17 Re: Sprint can start Friday evening - who would like to join Matus Kalas
2023/01/17 Re: Sprint can start Friday evening - who would like to join Sascha Steinbiss
2023/01/16 Re: Sprint can start Friday evening - who would like to join Andreas Tille
2023/01/16 Re: Sprint can start Friday evening - who would like to join Sascha Steinbiss
2023/01/16 Re: Sprint can start Friday evening - who would like to join Pierre Gruet
2023/01/16 Sprint can start Friday evening - who would like to join Andreas Tille
2023/01/11 Bug#1021934: marked as done (ITP: biojava6-live -- Java API to biological data and applications (version 6)) Debian Bug Tracking System
2023/01/08 Re: Packages in non-free can be autobuilt Andreas Tille
2023/01/08 Re: Packages in non-free can be autobuilt Graham Inggs
2023/01/05 Debian Med video conference tomorrow, first Friday of January 2023-01-06 18:00 UTC Andreas Tille
2023/01/04 Re: Sprint: won t be able to come Andreas Tille
2023/01/02 Re: python-biopython: FTBFS: Test DSSP generation from MMCIF with non-standard residues. Nilesh Patra
2023/01/02 Re: libcifpp-data.postrm cron and piuparts (was: Re: Help requested, don't know what to do) Maarten L. Hekkelman
2023/01/02 Re: libcifpp-data.postrm cron and piuparts (was: Re: Help requested, don't know what to do) Joost van Baal-Ilić
2023/01/02 Re: libcifpp-data.postrm cron and piuparts (was: Re: Help requested, don't know what to do) Joost van Baal-Ilić
2023/01/02 libcifpp-data.postrm cron and piuparts (was: Re: Help requested, don't know what to do) Joost van Baal-Ilić
2023/01/02 Re: libcifpp-data.postrm cron and piuparts (was: Re: Help requested, don't know what to do) Maarten L. Hekkelman
2023/01/02 Re: libcifpp-data.postrm cron and piuparts (was: Re: Help requested, don't know what to do) Maarten L. Hekkelman
2023/01/02 Help requested, don't know what to do Maarten L. Hekkelman
2023/01/02 Re: python-biopython: FTBFS: Test DSSP generation from MMCIF with non-standard residues. Maarten L. Hekkelman
2023/01/02 Re: python-biopython: FTBFS: Test DSSP generation from MMCIF with non-standard residues. Maarten L. Hekkelman
2023/01/01 Re: python-biopython: FTBFS: Test DSSP generation from MMCIF with non-standard residues. Nilesh Patra
2023/01/01 Bug#1027677: RM: pairtools [s390x] -- ROM; build-deps on pysam which is un-available on s390 Nilesh Patra
2022/12/31 Sprint: won t be able to come olivier sallou
2022/12/24 Re: [Advent Bug Squashing] My bug fixes during advent calendar Andreas Tille
2022/12/24 [Advent bug squashing] #1026659 and #1026764 (Was: Re: [RFH] aeonbits-owner and capsule-maven-nextflow) Pierre Gruet
2022/12/24 [Advent bug squashing] fixed bug #1026913 in paml Étienne Mollier
2022/12/24 [Advent Bug Squashing] My bug fixes during advent calendar Nilesh Patra
2022/12/23 [Advent bug squashing] fixed ftbfs on !x86 in python-biopython Étienne Mollier
2022/12/23 Re: autoremoval Nilesh Patra
2022/12/23 autoremoval Maarten L. Hekkelman
2022/12/22 Re: [RFH] aeonbits-owner and capsule-maven-nextflow Andreas Tille
2022/12/22 Re: [RFH] aeonbits-owner and capsule-maven-nextflow Andreas Tille
2022/12/22 Re: [RFH] aeonbits-owner and capsule-maven-nextflow Nilesh Patra
2022/12/22 Re: [RFH] aeonbits-owner and capsule-maven-nextflow Pierre Gruet
2022/12/22 [RFH] aeonbits-owner and capsule-maven-nextflow Nilesh Patra
2022/12/20 Re: Any idea how to fix the UTF-8 errors in augur? Nilesh Patra
2022/12/20 Any idea how to fix the UTF-8 errors in augur? Andreas Tille
2022/12/20 [Advent bug squashing] bug #1026734 from new archive wide rebuild bug series Andreas Tille
2022/12/19 [Advent bug squashing] fixed bug #988848 in bamtools Étienne Mollier
2022/12/18 Fwd: Re: Fwd: flexbar is marked for autoremoval from testing Tony Travis
2022/12/18 [Advent bug squashing] fixed bug #1026344 in insilicoseq Étienne Mollier
2022/12/18 [Advent bug squashing] fixed bug #921566 in deepnano Étienne Mollier
2022/12/18 [Advent bug squashing] fixed bug #1024835 in python-pauvre Étienne Mollier
2022/12/17 Re: [Advent bug squashing] Fwd: Bug#1025953: marked as done (beast-mcmc: only usable with OpenCL) Andrius Merkys
2022/12/17 Re: Debian Med video conference tomorrow, third Sunday of December 2022-12-18 18:00 UTC Andreas Tille
2022/12/16 [Advent bug squashing] Fwd: Bug#1025953: marked as done (beast-mcmc: only usable with OpenCL) Pierre Gruet
2022/12/14 [Advent bug squashing] fixed bug #1021675 (merged with 1022508) in ariba Étienne Mollier
2022/12/13 Re: sprint 2023 Sascha Steinbiss
2022/12/13 Re: sprint 2023 Andreas Tille
2022/12/13 Re: sprint 2023 olivier sallou
2022/12/12 Re: sprint 2023 Sascha Steinbiss
2022/12/12 Re: [Advent bug squashing] This weekend: closed #1025887, eased testing migration, opened more bugs Andreas Tille
2022/12/11 [Advent bug squashing] This weekend: closed #1025887, eased testing migration, opened more bugs Pierre Gruet
2022/12/11 [Advent bug squashing] This weekend I fixed #994459, #1024821 and #1025739 Andreas Tille
2022/12/10 Re: About LTO bugs in med packages Andreas Tille
2022/12/10 Re: About LTO bugs in med packages Étienne Mollier
2022/12/09 [Advent bug squashing] fixed bug #1018610 in recan Étienne Mollier
2022/12/09 sprint 2023 olivier sallou
2022/12/08 [Advent bug squashing] fixed bug #1018422 in nibabel Étienne Mollier
2022/12/08 Re: Seqan2 FTBFS Andreas Tille
2022/12/07 [Advent bug squashing] fixed bug #1018636 in scoary Étienne Mollier
2022/12/07 Re: Seqan2 FTBFS olivier sallou
2022/12/07 Re: Seqan2 FTBFS Andrius Merkys
2022/12/07 Re: Seqan2 FTBFS olivier sallou
2022/12/06 Re: [Advent bug squashing] dcmtk: closed Bug#990134 and Bug#990135 Andreas Tille
2022/12/06 Re: [Advent bug squashing] dcmtk: closed Bug#990134 and Bug#990135 Mathieu Malaterre
2022/12/06 Re: Seqan2 FTBFS Andrius Merkys
2022/12/06 Seqan2 FTBFS Andreas Tille
2022/12/06 [Advent bug squashing] fixed bug #1018603 in pyxnat Étienne Mollier
2022/12/06 [Advent bug squashing] dcmtk: closed Bug#990134 and Bug#990135 Andreas Tille
2022/12/06 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Helmut Grohne
2022/12/06 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Nilesh Patra
2022/12/06 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Andreas Tille
2022/12/06 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Helmut Grohne
2022/12/05 [Advent bug squashing] #989927 also fixed in past itk4 upload. Étienne Mollier
2022/12/05 [Advent bug squashing] bugs addressed by last itk4 upload (#801367, #977473) Étienne Mollier
2022/12/05 [Advent bug squashing] #1021423 of qtltools, #1011021 of libdeflate-dev Andreas Tille
2022/12/05 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Andreas Tille
2022/12/05 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Nilesh Patra
2022/12/04 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Andreas Tille
2022/12/04 Re: [Advent bug squashing] python-biopython back with tests (#1009118, #1022307) Andrius Merkys
2022/12/04 Re: Bug#982384: [Help] Bug 982384: Warnings profile count data file not found Aaron M. Ucko
2022/12/04 [Advent bug squashing] python-biopython back with tests (#1009118, #1022307) Étienne Mollier
2022/12/04 [Advent bug squashing] finalized python-gffutils to close #1018501 Étienne Mollier
2022/12/04 [Advent bug squashing] fixed bug #1018492 in python-fitbit Étienne Mollier
2022/12/04 Re: [Advent bug squashing] fixed in #1018506 in python-gtfparse Étienne Mollier
2022/12/04 Re: [Advent bug squashing] fixed in #1018506 in python-gtfparse Mohd Bilal
2022/12/04 About LTO bugs in med packages Nilesh Patra
2022/12/04 Re: [Advent bug squashing] fixed in #1018506 in python-gtfparse Étienne Mollier
2022/12/04 [Help] Bug 982384: Warnings profile count data file not found Andreas Tille
2022/12/04 [Advent bug squashing] fixed in #1018506 in python-gtfparse Mohd Bilal
2022/12/04 Re: [Advent bug squashing] Re: PIQUE Tony Travis
2022/12/04 Re: [Advent bug squashing] Re: PIQUE Tony Travis
2022/12/04 Re: [Advent bug squashing] Re: PIQUE Tony Travis
2022/12/04 Re: [Advent bug squashing] Re: PIQUE Andreas Tille
2022/12/04 Re: [Advent bug squashing] Re: PIQUE Tony Travis
2022/12/04 [Advent bug squashing] 860158 python-pbcore: Cleaning up old bugs from BTS Andreas Tille
2022/12/04 [Advent bug squashing] #846858 src:ea-utils: Just cleanup BTS Andreas Tille
2022/12/03 Re: [help] vdjtools autopkgtest fails Pierre Gruet
2022/12/03 Re: Help for unifrac autopkgtest needed Andreas Tille
2022/12/03 [Advent bug squashing] Re: PIQUE Andreas Tille
2022/12/03 PIQUE Tony Travis
2022/12/03 Re: Help for unifrac autopkgtest needed Étienne Mollier
2022/12/03 [Advent bug squashing] fixed bug #1018533 in python-mne Étienne Mollier
2022/12/03 [Advent bug squashing] fixed bug #1018551 in python-pbcore Étienne Mollier
2022/12/03 Re: [Advent bug squashing] fixed bug #1018377 in insilicoseq Étienne Mollier
2022/12/03 Re: [Advent bug squashing] fixed bug #1018377 in insilicoseq Mohd Bilal
2022/12/03 Re: [Advent bug squashing] fixed bug #1018377 in insilicoseq Étienne Mollier
2022/12/03 Re: [Advent bug squashing] fixed bug #1018377 in insilicoseq Mohd Bilal
2022/12/03 [Advent bug squashing] fixed bug #1018559 in python-pyani Étienne Mollier
2022/12/03 Re: [Advent bug squashing] fixed bug #1018377 in insilicoseq Étienne Mollier
2022/12/03 [Advent bug squashing] fixed bug #1018377 in insilicoseq Mohd Bilal
2022/12/03 [Advent bug squashing] fixed bug #1018565 in python-pymummer Étienne Mollier
2022/12/03 [Advent bug squashing] fixed bug #1018582 in python-sqt Étienne Mollier
2022/12/02 [Advent bug squashing] fixed #1015882 in dicomscope Andreas Tille
2022/12/02 [Advent bug squashing] fixed bug #1018407 in mirtop Étienne Mollier
2022/12/02 [Advent bug squashing] fixed bug #1018382 in iva Étienne Mollier
2022/12/02 [Advent bug squashing] bamtools #992143 fixed Andreas Tille
2022/12/02 [Advent bug squashing] fixed bug #1018477 in python-deeptools Étienne Mollier
2022/12/02 [Advent bug squashing] fixed bug #1025116 in python-pybedtools Étienne Mollier
2022/12/02 Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Andreas Tille
2022/12/02 [Advent bug squashing] repaired python-nanoget watch file Étienne Mollier
2022/12/02 Debian Med sprint January 21.+22. 2023 (in person meeting) Andreas Tille
2022/12/01 Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Étienne Mollier
2022/12/01 Re: [Advent bug squashing] Just closed bug #1024954 of librcsb-core-wrapper Andreas Tille
2022/12/01 Re: [Advent bug squashing] Just closed bug #1024954 of librcsb-core-wrapper Nilesh Patra
2022/12/01 Debian Med video conference tomorrow, first Friday of December 2022-12-02 18:00 UTC Andreas Tille
2022/11/30 Help for unifrac autopkgtest needed Andreas Tille
2022/11/30 Debian Med sprint January 2023 (in person meeting) Andreas Tille
2022/11/30 [Advent bug squashing] Just closed bug #1024954 of librcsb-core-wrapper Andreas Tille
2022/11/30 December is bug squashing month Andreas Tille
2022/11/30 Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Andreas Tille
2022/11/29 Re: Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Étienne Mollier
2022/11/29 Re: Cmake help to upgrade spoa needed Andreas Tille
2022/11/29 Re: Cmake help to upgrade spoa needed Nilesh Patra
2022/11/29 Cmake help to upgrade spoa needed Andreas Tille
2022/11/29 Several issues solved but python issue remaining (Was: [Help] Build issue of latest version of libsbml (probably Java compatibility issue)) Andreas Tille
2022/11/28 Bug#1024986: python-biopython: does not vendor bindings for python3.11 yet Nilesh Patra
2022/11/27 Re: [help] vdjtools autopkgtest fails Pierre Gruet
2022/11/26 [help] vdjtools autopkgtest fails Andreas Tille
2022/11/26 Re: [Help] Build issue of latest version of libsbml (probably Java compatibility issue) Andreas Tille
2022/11/26 Re: [Help] Build issue of latest version of libsbml (probably Java compatibility issue) Pierre Gruet
2022/11/26 Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
2022/11/25 Re: cmake help needed for rampler Andreas Tille
2022/11/25 Re: cmake help needed for rampler Nilesh Patra
2022/11/25 cmake help needed for rampler Andreas Tille
2022/11/25 Re: python3-biopython: incompatible with muscle >= 5 Andreas Tille
2022/11/25 [Help] Build issue of latest version of libsbml (probably Java compatibility issue) Andreas Tille
2022/11/24 Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
2022/11/24 Re: python3-biopython: incompatible with muscle >= 5 Andreas Tille
2022/11/24 Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
2022/11/24 Re: Race condition in uploading libmcfp Andreas Tille
2022/11/24 Re: Race condition in uploading libmcfp Maarten L. Hekkelman
2022/11/24 Race condition in uploading libmcfp Andreas Tille
2022/11/24 Re: dssp Andrius Merkys
2022/11/24 dssp Maarten L. Hekkelman
2022/11/24 Re: Bug#1009118: Bug#1009118: python3-biopython: incompatible with muscle >= 5 Andreas Tille
2022/11/24 Re: [Debian-med-packaging] Bug#1009118: python3-biopython: incompatible with muscle >= 5 Steffen Moeller
2022/11/24 Re: Help needed with python-cobra and python-pyani Andrius Merkys
2022/11/24 Re: Help needed with python-cobra and python-pyani Andreas Tille
2022/11/23 Re: Help needed with python-cobra and python-pyani Nilesh Patra
2022/11/23 Re: [Debian-med-packaging] Bug#1009118: python3-biopython: incompatible with muscle >= 5 Charles Plessy
2022/11/23 Re: python3-biopython: incompatible with muscle >= 5 Étienne Mollier
2022/11/23 Help needed with python-cobra and python-pyani Andreas Tille
2022/11/23 Re: Possibility of In-person sprints in 2023? Andreas Tille
2022/11/23 Re: Possibility of In-person sprints in 2023? olivier sallou
2022/11/23 Re: Possibility of In-person sprints in 2023? Andreas Tille
2022/11/22 Re: Possibility of In-person sprints in 2023? Pierre Gruet