Hi Andreas, I finally found some time to push an autopkgtest for unicycler :) A bit of rearrangement was also done in unicycler-data [1].
On Thu, 27 Sep 2018 at 16:28 Andreas Tille <[email protected]> wrote: > On Thu, Sep 27, 2018 at 01:37:37PM +0200, Liubov Chuprikova wrote: > > > > Instead of this, it is possible to put into the run-unit-test script the > > same commands that are recommended in "Quick Usage" paragraph of > README.md > > [1]. For this, I moved sample_data provided by upstream into a separate > > package unicycler-data [2]. > > > > [1] https://github.com/rrwick/Unicycler#quick-usage > > [2] > > > https://salsa.debian.org/med-team/unicycler/commit/a3b90a3a5c00e9b83a48c7746b4aa598202c8642 > > Makes perfectly sense to do real usage cases. (This is actually way better > than running build time tests.) > > > While trying to run an autopkgtest with the commands in "Quick Usage" I > got > > the following error: > > > Assembling reads with miniasm... empty result > > Error: miniasm assembly failed > I also wrote to upstream about the error above [2]. Although, I have a suspicion that the reads provided just do not assemble with enough coverage and thus the command fails. But let's see what will be their answer.. Best regards, Liubov [1] https://salsa.debian.org/med-team/unicycler/commit/96bf168efaba6402dab9b26f0c9df4453977db35 [2] https://github.com/rrwick/Unicycler/issues/149
