Hi All
I'm running ray on my library (~150 bp read length –interleved illumina pair 
end reads) using the following code

mpiexec -n 32 Ray -k 75 -i Fem_Bowtie_filtered_shuffled.fastq -o Ray_Test_F

Afetr a while of running I get the following output and error message:

Step: Sequence loading
Date: Mon Oct 21 15:50:00 2013
Elapsed time: 1 hours, 34 minutes, 42 seconds
Since beginning: 1 hours, 47 minutes, 42 seconds
***


[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686981400 bytes for table with 5495851200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
[BloomFilter] allocated 686978400 bytes for table with 5495827200 bits
Bus error
-system-specific-4.1$


Any help will be highly appreciated

---------------------------------------------------------------------------------
Andres Gomez
Institute for Genomic Biology
Animal Science Department
University of Illinois at Urbana-Champaign
amgo...@illinois.edu
Office+1 217 333 7958
Cell       +1 217 418 0438


------------------------------------------------------------------------------
October Webinars: Code for Performance
Free Intel webinars can help you accelerate application performance.
Explore tips for MPI, OpenMP, advanced profiling, and more. Get the most from 
the latest Intel processors and coprocessors. See abstracts and register >
http://pubads.g.doubleclick.net/gampad/clk?id=60135991&iu=/4140/ostg.clktrk
_______________________________________________
Denovoassembler-users mailing list
Denovoassembler-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/denovoassembler-users

Reply via email to