On 05/11/13 17:52, Rob Egan wrote: > Through trial and error, I discovered that if I include shredded contigs > greater than ~16kb, then it segfaults, but if they are 16000 bases or less, > then everything completes successfully. (I did not find the > actual limit)
Try a couple of lengths around 16384. That's a magic number in computers. - David ------------------------------------------------------------------------------ November Webinars for C, C++, Fortran Developers Accelerate application performance with scalable programming models. Explore techniques for threading, error checking, porting, and tuning. Get the most from the latest Intel processors and coprocessors. See abstracts and register http://pubads.g.doubleclick.net/gampad/clk?id=60136231&iu=/4140/ostg.clktrk _______________________________________________ Denovoassembler-users mailing list Denovoassembler-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/denovoassembler-users