On 11/12/13 05:44 PM, sheerli kruger wrote: > Hi Sebastien, > We will be using approximately 350 computing nodes. > Thank you,
How many cores per node do you have ? > Sheerli > > > ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ > *From:* Sébastien Boisvert <sebastien.boisver...@ulaval.ca> > *To:* sheerli kruger <sheer...@yahoo.com> > *Cc:* "denovoassembler-users@lists.sourceforge.net" > <denovoassembler-users@lists.sourceforge.net> > *Sent:* Wednesday, December 11, 2013 6:32 PM > *Subject:* Re: [Denovoassembler-users] Running meta ray > > On 11/12/13 03:11 AM, sheerli kruger wrote: > > > Dear mailing list, > > I have a metagenome of about 2.5B reads of 150 length. If I choose to use > the meta ray assembler, what would be the parameters that could influence the > running time and computational resources (assuming the genomes comprising the > metagenomes follow power law)? > > Is there a log in which I can monitor the progress of my job? > > Tank you very much, > > Sheerli > > > > > How many compute nodes will you use to assemble 2 500 000 000 reads ? > > > ------------------------------------------------------------------------------ Rapidly troubleshoot problems before they affect your business. Most IT organizations don't have a clear picture of how application performance affects their revenue. With AppDynamics, you get 100% visibility into your Java,.NET, & PHP application. Start your 15-day FREE TRIAL of AppDynamics Pro! http://pubads.g.doubleclick.net/gampad/clk?id=84349831&iu=/4140/ostg.clktrk _______________________________________________ Denovoassembler-users mailing list Denovoassembler-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
