Hi,
We are trying to install latest version of Ray on our HPC cluster and it
throws the following error:
[root@login1 Ray-2.3.0]# make
CXX code/application_core/ray_main.o
In file included from
/app/l_ics_2012/impi/4.0.3.008/intel64/include/mpi.h:1221,
from RayPlatform/RayPlatform/memory/DirtyBuffer.h:27,
from RayPlatform/RayPlatform/memory/RingAllocator.h:25,
from ./code/SeedingData/SeedWorker.h:28,
from ./code/SeedingData/SeedingData.h:27,
from ./code/SeedExtender/DepthFirstSearchData.h:27,
from code/application_core/Machine.h:37,
from code/application_core/ray_main.cpp:22:
/app/l_ics_2012/impi/4.0.3.008/intel64/include/mpicxx.h:93:2: error:
#error "SEEK_SET is #defined but must not be for the C++ binding of MPI.
Include mpi.h before stdio.h"
/app/l_ics_2012/impi/4.0.3.008/intel64/include/mpicxx.h:97:2: error:
#error "SEEK_CUR is #defined but must not be for the C++ binding of MPI.
Include mpi.h before stdio.h"
/app/l_ics_2012/impi/4.0.3.008/intel64/include/mpicxx.h:102:2: error:
#error "SEEK_END is #defined but must not be for the C++ binding of MPI.
Include mpi.h before stdio.h"
make: *** [code/application_core/ray_main.o] Error 1
As per the above error we have the solution (Pls find the link)
--
So, it clearly needs mpi.h defined before stdio.h. I am wondering in which
file we should make this change.
Best
Sucheta
--
Sucheta Tripathy, Ph.D
Scientist, Ramalingaswamy Fellow,
Indian Institute of Chemical Biology,
Kolkata, India.
https://sites.google.com/site/suchetalab/
https://twitter.com/tsucheta
------------------------------------------------------------------------------
Rapidly troubleshoot problems before they affect your business. Most IT
organizations don't have a clear picture of how application performance
affects their revenue. With AppDynamics, you get 100% visibility into your
Java,.NET, & PHP application. Start your 15-day FREE TRIAL of AppDynamics Pro!
http://pubads.g.doubleclick.net/gampad/clk?id=84349831&iu=/4140/ostg.clktrk
_______________________________________________
Denovoassembler-users mailing list
Denovoassembler-users@lists.sourceforge.net
https://lists.sourceforge.net/lists/listinfo/denovoassembler-users