Hi!  I’m working on an assembly of a non-model avian genome.  We currently have 
Illumina paired-end reads that I’d like to use for contig building, as well as 
both a mate pair library and low coverage Illumina TruSeq synthetic reads 
(formerly Moleculo) that I’d like to use for scaffolding.  Is this possible 
(and advisable) with RAY?
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