> From: Doyle, Jacqueline R M [jmdo...@purdue.edu] > Sent: Friday, January 02, 2015 6:01 PM > To: denovoassembler-users@lists.sourceforge.net > Subject: [Denovoassembler-users] assembly w/ TruSeq synthetic reads? > > > > Hi! I’m working on an assembly of a non-model avian genome. > We currently have Illumina paired-end reads that I’d like to use for contig > building, as well as both a mate pair library and low coverage Illumina > TruSeq synthetic reads (formerly Moleculo) that I’d like to use for > scaffolding. > Is this possible (and advisable) with RAY?
Contig building is possible with Ray. You are better off doing the scaffolding with another tool though. > > ------------------------------------------------------------------------------ Dive into the World of Parallel Programming! The Go Parallel Website, sponsored by Intel and developed in partnership with Slashdot Media, is your hub for all things parallel software development, from weekly thought leadership blogs to news, videos, case studies, tutorials and more. Take a look and join the conversation now. http://goparallel.sourceforge.net _______________________________________________ Denovoassembler-users mailing list Denovoassembler-users@lists.sourceforge.net https://lists.sourceforge.net/lists/listinfo/denovoassembler-users
