It's really nice to hear that it's useful for your research.

With best regards,

-----------------------------------------------------------------
Jinwon Kim
Joint Institute for Regional Earth System Science and Engineering and Dept. 
Atmospheric and Oceanic Sciences
University of California, Los Angeles
607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA 
90095-7228, USA
[email protected]; 310-206-2828
________________________________________
From: Rashyd ZAABOUL [[email protected]]
Sent: Monday, June 02, 2014 10:08 PM
To: Mattmann, Chris A (3980)
Cc: Kim, Jinwon; [email protected]; [email protected]; Joyce, Michael 
J (398J); rcmes-dev; Goodale, Cameron E (398J); [email protected]; 
Mcgibbney, Lewis J (398J)
Subject: Re: failed to run rcmes following the step-by-step document

Thank you Chris and many thanks to all your colleagues for their help. It's 
very useful tool and I keep sending requests to the mailing lists you mentioned.

Kim, I'll look at the code and try to use the function calc_pdf.

Thanks and best regards
Rashyd


2014-06-02 20:13 GMT+04:00 Mattmann, Chris A (3980) 
<[email protected]<mailto:[email protected]>>:
Thanks Guys. Rashyd, I just wanted to let you know to feel free to
keep sending any questions you have to 
[email protected]<mailto:[email protected]> and
including the mailing list as it really helps to show the activity
going on.

++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Chris Mattmann, Ph.D.
Chief Architect
Instrument Software and Science Data Systems Section (398)
NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
Office: 168-519, Mailstop: 168-5th floor
Email: [email protected]<mailto:[email protected]>
WWW:  http://sunset.usc.edu/~mattmann/
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
Adjunct Associate Professor, Computer Science Department
University of Southern California, Los Angeles, CA 90089 USA
++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++






-----Original Message-----
From: <Kim>, Jinwon <[email protected]<mailto:[email protected]>>
Date: Monday, June 2, 2014 7:56 AM
To: Rashyd ZAABOUL <[email protected]<mailto:[email protected]>>
Cc: Chris Mattmann 
<[email protected]<mailto:[email protected]>>,
"[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>, 
"[email protected]<mailto:[email protected]>"
<[email protected]<mailto:[email protected]>>, "Joyce, Michael J 
(398J)"
<[email protected]<mailto:[email protected]>>, rcmes-dev 
<[email protected]<mailto:[email protected]>>,
"Goodale, Cameron E (398J)" 
<[email protected]<mailto:[email protected]>>,
"[email protected]<mailto:[email protected]>" 
<[email protected]<mailto:[email protected]>>, "Mcgibbney, Lewis J
(398J)" <[email protected]<mailto:[email protected]>>
Subject: RE: failed to run rcmes following the step-by-step document

>Glad to hear it works.
>
>pdf calculation is not included in the metrics menu at this time, but a
>routine to calculate 'pdf skill score', i.e., an area common to two pdfs
>(e.g., model and observations) is available in the code. the routine is:
>'calc_pdf' in the code
>"rcmet2.1.3/src/main/python/rcmes/toolkit/metrics.py".
>
>to access/modify,
>(1) go to the directory "rcmet2.1.3/src/main/python/rcmes/toolkit",
>(2) edit the file 'metrics.py' using an editor, for example, "vi
>metrics.py",
>(3) look for 'def calc_pdf(dataset_1, dataset_2):'
>
>if you are familiar with python, you may be able to use that routine to
>create an option to calculate pdf's (and cdf's). if you are not familiar
>with python, we can add it to the next release, but will take a few weeks.
>
>
>Hope this is helpful.
>
>
>Best,
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>[email protected]<mailto:[email protected]>; 310-206-2828
>________________________________________
>From: Rashyd ZAABOUL [[email protected]<mailto:[email protected]>]
>Sent: Monday, June 02, 2014 3:50 AM
>To: Kim, Jinwon
>Cc: Mattmann, Chris A (3980); 
>[email protected]<mailto:[email protected]>;
>[email protected]<mailto:[email protected]>; Joyce, Michael J 
>(398J); rcmes-dev; Goodale,
>Cameron E (398J); [email protected]<mailto:[email protected]>; 
>Mcgibbney, Lewis J (398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi all,
>It's working now and I'm getting results using RCMs and GCMs vs TRMM, CRU
>... Now I've two questions :
>- Is it possible to compute PDFs and CDFs and other metrics?
>- Is it possible to compute these metrics on other parameters such as 2m
>temperature, 500mb height, wind at different levels to compare with
>reanalysis for example?
>
>Best regards
>Rashyd
>
>
>2014-06-01 12:50 GMT-04:00 Kim, Jinwon
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>:
>The problem was the correct rcmet.py was not copied to
>"rcmet2.1.3/src/main/python/bin". Copying rcmet.py in
>"rcmet2.1.3/src/main/python/rcmes" into "rcmet2.1.3/src/main/python/bin"
>will resolve this problem. I've always run rcmet from
>"rcmet2.1.3/src/main/python/rcmes" and did not recognize this until today.
>
>Will you please replace rcmet.py in "rcmet2.1.3/src/main/python/bin" with
>the one on "rcmet2.1.3/src/main/python/rcmes"? thanks.
>
>-----------------------------------------------------------------
>Jinwon Kim
>Joint Institute for Regional Earth System Science and Engineering and
>Dept. Atmospheric and Oceanic Sciences
>University of California, Los Angeles
>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>90095-7228, USA
>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>;
> 310-206-2828
>________________________________________
>From: Mattmann, Chris A (3980)
>[[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>]
>Sent: Sunday, June 01, 2014 9:43 AM
>To: Rashyd ZAABOUL; Kim, Jinwon
>Cc: 
>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>;
>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>;
> Joyce, Michael J
>(398J); rcmes-dev; Goodale, Cameron E (398J);
>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>;
> Mcgibbney, Lewis J
>(398J)
>Subject: Re: failed to run rcmes following the step-by-step document
>
>Hi Rashyd,
>
>I'm CC'ing the Apache list for the Open Climate Workbench project where
>we have a lot of eyes on the list. Maybe someone on the Apache list can
>help as well.
>
>Also we are happy to have a Skype/telecon with you this week to get
>your code working. Cam, Mike or Lewis or Mazi or Shakeh - can you guys
>work with Rashyd to get his problem fixed.
>
>Jinwon -- can you please let Cam, Mike or Lewis or Mazi or Shakeh, or
>Paul help out on this - they'll take it from here.
>
>Cheers,
>Chris
>
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Chris Mattmann, Ph.D.
>Chief Architect
>Instrument Software and Science Data Systems Section (398)
>NASA Jet Propulsion Laboratory Pasadena, CA 91109 USA
>Office: 168-519, Mailstop: 168-5th floor
>Email: 
>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>
>WWW:  http://sunset.usc.edu/~mattmann/
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>Adjunct Associate Professor, Computer Science Department
>University of Southern California, Los Angeles, CA 90089 USA
>++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++++
>
>
>
>
>
>
>-----Original Message-----
>From: Rashyd ZAABOUL 
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>
>Date: Sunday, June 1, 2014 2:31 AM
>To: "Kim, Jinwon (329M-Affiliate)"
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>
>Cc: 
>"[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>"
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>,
>"[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>"
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>,
> "Joyce, Michael J
>(398J)"
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>,
>rcmes-dev
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>,
> "Goodale,
>Cameron E (398J)"
><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>
>Subject: Re: failed to run rcmes following the step-by-step document
>
>>Hi Kim,What do you mean by all files are OK? the rcmet.py is not OK! it
>>contains params = db.getParams() on line 194 !!!
>>
>>
>>I've tried this tar file which is equal to the previous one (I've
>>modified the line 194 in rcmet.py) and I've got the same error:
>>
>>
>>File "rcmet.py <http://rcmet.ok.py/>", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>
>>
>>
>>Regards
>>Rashyd
>>
>>
>>
>>2014-06-01 11:26 GMT+04:00 Kim, Jinwon
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>:
>>
>>Hmm, I checked the tar file I sent - all files are OK. I'm sending the
>>tar file again. Please check this one out. Please clean up previous
>>versions and try the attached one with the included config file
>>(cordexMENA.cfg). This is the code/config file I used
>> to create the figures I sent in the earlier e-mail.
>>
>>For your error messages:
>>
>>(1) The parameter "obsSource" directs the code where to find observation
>>data for evaluation. "obsSource=1" is reserved for the case users provide
>>their own observation data. If you set obsSource=1 and do not provide
>>data, it will result in error exit as the
>> code cannot find the observation data file(s) specified by the user.
>>Thus, unless you provide your own observation data, obsSource=1 must not
>>be used.
>>
>>(2) The exit message "No input observation data file. EXIT" occurs when
>>there is no observation data file id's are assigned when obsSource=0 is
>>set. This can happen if "obsParamId" in the config file is not properly
>>set. We don't expect any problems if obsParamId
>> is correctly set because the data specified by obsParamId are included
>>in the database (this requires active internet connection). Will you send
>>me your configure file so that I can look at it?
>>
>>
>>
>>
>>Thanks for your patience.
>>
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL 
>>[[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>]
>>
>>Sent: Saturday, May 31, 2014 11:58 PM
>>To: Kim, Jinwon
>>Cc: 
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>;
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>
>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>;
>> Joyce,
>>Michael J
>>(398J); rcmes-dev;
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>
>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>.
>>gov>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>
>>Hi Kim,
>>
>>Thank you for your help. I'm sorry but I'm getting confused with all
>>these different packages I received from you and your colleagues!. The
>>last one you just sent to me still contains params = db.getParams() in
>>rcmet.py at line 194. I've replaced this file
>> with the one sent by Cameron before and it seems to be ok. But when I've
>>tried to reproduce the result you sent to me (with obsSource=1) I got
>>this error :
>>
>>...
>>data_prep is completed: both obs and mdl data are re-gridded to a common
>>analysis grid
>>Traceback (most recent call last):
>>  File "rcmet.py", line 299, in <module>
>>    runUsingConfig(args.CONFIG)
>>  File "rcmet.py", line 237, in runUsingConfig
>>
>>(jobProperties,obsSource,obsDatasetList,obsList,obsVarName,obsLonName,obs
>>L
>>atName,obsTimeName,obsTimestep,gridBox,models)
>>ValueError: too many values to unpack
>>
>>Do you know how can I fix this please?
>>
>>NOTE: with obsSource=0 I got :
>>No input observation data file. EXIT
>>
>>Thanks and regards
>>Rashyd
>>
>>
>>
>>2014-05-29 20:08 GMT+04:00 Kim, Jinwon
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>du<mailto:[email protected]<mailto:[email protected]>>>>:
>>To all,
>>
>>*** Please update your RCMET with the attached version 2.1.3. ***
>>
>>I found that some files included in the earlier tar file for the release
>>version 2.1.3 have some critical issues. Now I've applied all fixes and
>>successfully ran a test case with a MENA domain dataset; the version
>>works properly now. I apologize for inconvenience.
>>
>>Rashyd:
>>Please see the two attached figures for the MENA domain (model bias, GPCP
>>climatology for 1991-2000 over the MENA domain) for your reference. The
>>configure file for this processing is:
>>"rcmet2.1.3/src/main/python/rcmes/cordexcordexMENA.cfg". The analysis
>>domain has been adjusted to fit the MENA domain.
>>
>>
>>Aanjay and Rama:
>>The code also works fine with the India domain. The two attached figures
>>for the India domain shows the TRMM climatology for 98-2000 and the bias
>>of model ensemble against TRMM for the same period. The sample configure
>>file is: cordexIndia.cfg under resources/
>> (the same location as the MENA config file).
>>
>>Please contact me/mike/rcmes-dev if you have any questions.
>>
>>
>>With best regards,
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>u<mailto:[email protected]<mailto:[email protected]>>>; 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]><mai
>>lto:[email protected]<mailto:lto%[email protected]>>>]
>>
>>Sent: Thursday, May 29, 2014 12:07 AM
>>To: Kim, Jinwon
>>Cc: Joyce, Michael J (398J); rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>The package you've just sent to me contains the same rcmet.py as the
>>package 2.1.2 and has on line 194 :
>>   params = db.getParams()
>>
>>Is it the right one? Because I'm still having the same error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>>  File "rcmet.py", line 299, in <module>
>>    runUsingConfig(args.CONFIG)
>>  File "rcmet.py", line 194, in runUsingConfig
>>    params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>I've attached one of the files that I'm trying to use.
>>
>>Thanks again
>>Rashyd
>>
>>
>>
>>
>>2014-05-29 10:29 GMT+04:00 Kim, Jinwon
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>du<mailto:[email protected]<mailto:[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.ed>
>>u<mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>:
>>Here comes the attachment.
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>u<mailto:[email protected]<mailto:[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.edu<http://os.ucla.edu>>
>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]><mai
>>lto:[email protected]<mailto:lto%[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>
>>><mail
>>to:[email protected]<mailto:to%[email protected]><mailto:to%[email protected]<mailto:to%[email protected]>>>>]
>>
>>Sent: Wednesday, May 28, 2014 10:27 PM
>>To: Joyce, Michael J (398J)
>>Cc: Kim, Jinwon; rcmes-dev
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Michael,
>>
>>With the new Jinwon's RCMET version 2.1.3 I got this error :
>>
>>Running using config file: ../rcmes/resources/cordexAF.cfg
>>Traceback (most recent call last):
>>  File "rcmet.py", line 299, in <module>
>>    runUsingConfig(args.CONFIG)
>>  File "rcmet.py", line 194, in runUsingConfig
>>    params = db.getParams()
>>AttributeError: 'module' object has no attribute 'getParams'
>>
>>My
>>PYTHONPATH=/home/wrf/rcmet-2.1.3:/home/wrf/rcmet-2.1.3/src/main/python/rc
>>m
>>es
>>
>>I'm using files for precipitation exactly as I download them from ESGF
>>portal for CORDEX MENA domain. The files I'm using are :
>>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_197101
>>-
>>198012.nc<http://198012.nc><http://198012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_198101
>>-
>>199012.nc<http://199012.nc><http://199012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_199101
>>-
>>200012.nc<http://200012.nc><http://200012.nc>
>>pr_MNA-44_CNRM-CERFACS-CNRM-CM5_historical_r1i1p1_SMHI-RCA4_v1_mon_200101
>>-
>>200512.nc<http://200512.nc><http://200512.nc>
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_197101-19801
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_198101-19901
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_199101-20001
>>2
>>.nc
>>pr_MNA-44_ICHEC-EC-EARTH_historical_r12i1p1_SMHI-RCA4_v1_mon_200101-20051
>>2
>>.nc
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_197101-
>>1
>>98012.nc<http://98012.nc><http://98012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_198101-
>>1
>>99012.nc<http://99012.nc><http://99012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_199101-
>>2
>>00012.nc<http://00012.nc><http://00012.nc>
>>pr_MNA-44_NOAA-GFDL-GFDL-ESM2M_historical_r1i1p1_SMHI-RCA4_v1_mon_200101-
>>2
>>00512.nc<http://00512.nc><http://00512.nc>
>>
>>
>>Do I have to pre-process this data first before I can use it with RCMET ?
>>
>>I've attached my config file to check if I'm missing something.
>>
>>Thanks for your help
>>
>>Rashyd
>>
>>
>>
>>
>>2014-05-28 18:05 GMT+04:00 Joyce, Michael J (398J)
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto
>>:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailt
>>o:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>><mailt
>>o:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailto
>>:M<mailto:M<mailto:M>>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:Mi<mailto:Mi>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>>:
>>Hi Rashyd,
>>
>>It looks like your^1e using one of Jinwon^1s RCMET versions. He recently
>>released a newer version that may resolve some of your problems. You can
>>find and download it at [1]. I^1m sure Jinwon will be able to help you get
>>this resolved. Thank you for sending the
>> document you used. I^1ll be sure to get it and the website updated with
>>the correct information.
>>
>>[1]
>>https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3
>><https://github.com/apache/climate/tree/jinwon-rcmet-2.1.3>
>>
>>Thanks much!
>>
>>--
>>Michael J. Joyce
>>Engineering Applications Software Engineer
>>Instrument Software and Science Data Systems
>>NASA Jet Propulsion Laboratory
>>California Institute of Technology
>>4800 Oak Grove Drive
>>Pasadena, California 91109
>>Mail Stop: 158-242
>>Tel: (818) 354-7550
>>Fax: (818) 393-1370
>>
>>
>>
>>From: Rashyd ZAABOUL
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]><mai
>>lto:[email protected]<mailto:lto%[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>
>>><mail
>>to:[email protected]<mailto:to%[email protected]><mailto:to%[email protected]<mailto:to%[email protected]>>>><mailto:zaaboul@gmai<mailto:zaaboul@gmai>
>>l.com<http://l.com><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]><mailto:zaaboul@g<mailto:zaaboul@g>
>>mail.com<http://mail.com>>><
>>mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>om<mailto:[email protected]<mailto:[email protected]>>>>>>
>>Date: Wednesday, May 28, 2014 at 5:09 AM
>>
>>To: "Kim, Jinwon (329M-Affiliate)"
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>du<mailto:[email protected]<mailto:[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.ed>
>>u<mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>><mailto:jkim@at<mailto:jkim@at>
>>mos.ucla.edu<http://mos.ucla.edu><mailto:[email protected]<mailto:[email protected]>><mailto:jkim@atmo<mailto:jkim@atmo><mailto:jkim@atm<mailto:jkim@atm>
>>o>
>>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.edu<http://os.ucla.edu>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>>
>>Cc: rcmes-dev
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:rcmes-dev@j<mailto:rcmes-dev@j>
>>pl.nasa.gov<http://pl.nasa.gov><mailto:[email protected]<mailto:[email protected]>>><mailto:rcmes-dev@jp<mailto:rcmes-dev@jp><mailto:rc<mailto:rc>
>>mes-dev@jp>
>>l.nasa.gov<http://l.nasa.gov><http://l.nasa.gov><mailto:[email protected]<mailto:[email protected]><mailto:rcmes-<mailto:rcmes->
>>[email protected]<mailto:[email protected]>>>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>
>>sa.gov<http://sa.gov>><m
>>ailto:[email protected]<mailto:ailto%[email protected]><mailto:ailto%[email protected]<mailto:ailto%[email protected]>>><mail
>>to:[email protected]<mailto:to%[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:rcmes-d<mailto:rcmes-d><m
>>ailto:rcmes-d>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>>,
>> JPL
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto
>>:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailt
>>o:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>><mailt
>>o:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailto
>>:M<mailto:M<mailto:M>>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:Mi<mailto:Mi>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>>
>>Subject: Re: failed to run rcmes following the step-by-step document
>>
>>Hi Jim and Michael,
>>
>>I've modified the script
>>~rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py by replacing
>>json.loads function by simplejson.loads one to get more details on the
>>error and this is what I got :
>>
>>Running using config file: ../rcmes/resources/mena.cfg
>>Traceback (most recent call last):
>>  File "rcmet.py", line 299, in <module>
>>    runUsingConfig(args.CONFIG)
>>  File "rcmet.py", line 194, in runUsingConfig
>>    params = db.getParams()
>>  File "/home/rcmes/rcmet-2.1.2/src/main/python/rcmes/storage/rcmed.py",
>>line 27, in getParams
>>    paramDict = simplejson.loads(httpRequest.text)
>>  File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/__init__.py", line 501, in loads
>>    return _default_decoder.decode(s)
>>  File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 370, in decode
>>    obj, end = self.raw_decode(s)
>>  File
>>"/home/rcmes/anaconda/lib/python2.7/site-packages/simplejson-3.5.2-py2.7-
>>l
>>inux-x86_64.egg/simplejson/decoder.py", line 389, in raw_decode
>>    return self.scan_once(s, idx=_w(s, idx).end())
>>simplejson.scanner.JSONDecodeError: Expecting value: line 1 column 1
>>(char 0)
>>
>>What does this error mean ? I'm afraid the database RCMED is down while
>>I'm trying to get data out of it !
>>
>>Best regards
>>Rashyd
>>
>>
>>
>>
>>2014-05-27 8:13 GMT-07:00 Kim, Jinwon
>><[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>du<mailto:[email protected]<mailto:[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.ed>
>>u<mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>><mailto:jkim@at<mailto:jkim@at>
>>mos.ucla.edu<http://mos.ucla.edu><mailto:[email protected]<mailto:[email protected]>><mailto:jkim@atmo<mailto:jkim@atmo><mailto:jkim@atm<mailto:jkim@atm>
>>o>
>>s.ucla.edu<http://s.ucla.edu><http://s.ucla.edu>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.edu<http://os.ucla.edu>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>>:
>>Thanks for your interests.
>>
>>For organizing your data:
>>
>>You can put your model data in your own directory. Then specify the link
>>to the data (or data files) in the configure file, [MODEL] block. The
>>code currently takes netcdf format files for input.
>>
>>If you use the observed data in the RCMES database, just specify the
>>parameter numbers in the [RCMED] block, also in the configure file. If
>>you use your own observation data, you can specify it in the same block
>>(it also takes netcdf-format files).
>>
>>Hope this helps.
>>
>>
>>With best regards,
>>
>>-----------------------------------------------------------------
>>Jinwon Kim
>>Joint Institute for Regional Earth System Science and Engineering and
>>Dept. Atmospheric and Oceanic Sciences
>>University of California, Los Angeles
>>607 Charles E Young Drive East, Young Hall, Room 4242, Los Angeles, CA
>>90095-7228, USA
>>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>u<mailto:[email protected]<mailto:[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.edu<http://os.ucla.edu>>
>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>><mailto:jkim@atm<mailto:jkim@atm>
>>os.ucla.edu<http://os.ucla.edu><mailto:[email protected]<mailto:[email protected]>><mailto:jkim@atmos<mailto:jkim@atmos><mailto:jkim@atm<mailto:jkim@atm>
>>os>
>>.ucla.edu<http://ucla.edu><http://ucla.edu>><mailto:[email protected]<mailto:[email protected]><mailto:jkim@atmos<mailto:jkim@atmos>.
>>ucla.edu<http://ucla.edu>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>;
>> 310-206-2828
>>________________________________________
>>From: Rashyd ZAABOUL
>>[[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]><mai
>>lto:[email protected]<mailto:lto%[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>
>>><mail
>>to:[email protected]<mailto:to%[email protected]><mailto:to%[email protected]<mailto:to%[email protected]>>>><mailto:zaaboul@gmai<mailto:zaaboul@gmai>
>>l.com<http://l.com><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]><mailto:zaaboul@g<mailto:zaaboul@g>
>>mail.com<http://mail.com>>><
>>mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:[email protected]<mailto:[email protected]>
>>om<mailto:[email protected]<mailto:[email protected]>>>>>]
>>Sent: Tuesday, May 27, 2014 7:59 AM
>>
>>To:
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:rcmes-dev@jp<mailto:rcmes-dev@jp>
>>l.nasa.gov<http://l.nasa.gov><mailto:[email protected]<mailto:[email protected]>>><mailto:rcmes-dev@jpl<mailto:rcmes-dev@jpl><mailto:rc<mailto:rc>
>>mes-dev@jpl>
>>.nasa.gov<http://nasa.gov><http://nasa.gov><mailto:[email protected]<mailto:[email protected]><mailto:rcmes-dev<mailto:rcmes-dev>
>>@jpl.nasa.gov<http://jpl.nasa.gov>>>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>.
>>gov><ma
>>ilto:[email protected]<mailto:ilto%[email protected]><mailto:ilto%[email protected]<mailto:ilto%[email protected]>>><mailto
>>:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:rcmes-de<mailto:rcmes-de><ma
>>ilto:rcmes-de>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>>>
>>Subject: failed to run rcmes following the step-by-step document
>>
>>Hi
>>I'm trying to use RCMES to evaluate CORDEX models outputs against CRU,
>>TRMM ... I followed the step-by-step document but it seems that something
>>is missing there. For example it doesn't tell how to organize my data?
>>where to put the observations ...
>>
>>Could you please provide me with any useful documentation that can help
>>me setup RCMES to evaluate those models?
>>
>>Thanks
>>Rashyd
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile  : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.za<mailto:r.za>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios>
>>aline.org.ae<http://aline.org.ae><mailto:[email protected]<mailto:[email protected]>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><mailto:[email protected]<mailto:[email protected]>
>>.ae<mailto:[email protected]<mailto:[email protected]>>><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios><mailto:r.za<mailto:r.za>
>>aboul@bios>
>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:[email protected]<mailto:[email protected]><mailt
>>o:[email protected]<mailto:o%[email protected]>>>>><mailto:r.zaaboul@biosali<mailto:r.zaaboul@biosali><mailto:r.zaabou<mailto:r.zaabou>
>>l@biosali>
>>ne.org.ae<http://ne.org.ae><http://ne.org.ae><mailto:[email protected]<mailto:[email protected]><mailto:r.za<mailto:r.za>
>>[email protected]<mailto:[email protected]>>><mailto:[email protected]<mailto:[email protected]><mailto:r.zaaboul@b<mailto:r.zaaboul@b>
>>iosaline.or>
>>g.ae<http://g.ae><http://g.ae><mailto:[email protected]<mailto:[email protected]><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios>
>>aline.org.ae<http://aline.org.ae>>>><mailto:[email protected]<mailto:[email protected]><mailto:r.zaaboul@biosal<mailto:r.zaaboul@biosal>
>>ine.org.ae<http://ine.org.ae>>
>><mailto:[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><ma
>>ilto:[email protected]<mailto:ilto%[email protected]><mailto:[email protected]<mailto:[email protected]>><mail
>>to:[email protected]<mailto:to%[email protected]><mailto:to%[email protected]<mailto:to%[email protected]>>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile  : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.za<mailto:r.za>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios>
>>aline.org.ae<http://aline.org.ae><mailto:[email protected]<mailto:[email protected]>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><mailto:[email protected]<mailto:[email protected]>
>>.ae<mailto:[email protected]<mailto:[email protected]>>><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios><mailto:r.za<mailto:r.za>
>>aboul@bios>
>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:[email protected]<mailto:[email protected]><mailt
>>o:[email protected]<mailto:o%[email protected]>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile  : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.za<mailto:r.za>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios>
>>aline.org.ae<http://aline.org.ae><mailto:[email protected]<mailto:[email protected]>>>><mailto:r.zaaboul<mailto:r.zaaboul><mailto
>>:r.zaaboul>
>>@biosaline.org.ae<http://biosaline.org.ae><http://biosaline.org.ae><mailto:[email protected]<mailto:[email protected]>
>>.ae<mailto:[email protected]<mailto:[email protected]>>><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios><mailto:r.za<mailto:r.za>
>>aboul@bios>
>>aline.org.ae<http://aline.org.ae><http://aline.org.ae><mailto:[email protected]<mailto:[email protected]><mailt
>>o:[email protected]<mailto:o%[email protected]>>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile  : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.za<mailto:r.za>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>><mailto:r.zaa<mailto:r.zaa><m
>>ailto:r.zaa>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.zaaboul@bios<mailto:r.zaaboul@bios>
>>aline.org.ae<http://aline.org.ae><mailto:[email protected]<mailto:[email protected]>>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>Climate and Water Modeling Scientist
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile  : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>><mailto:r.za<mailto:r.za>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>>
>>
>>
>>
>>
>>
>>--
>>Rashyd Zaaboul
>>
>>Climate and Water Modeling Scientist
>>
>>International Center for Biosaline Agriculture
>>P.O. Box 14660 Dubai, UAE
>>Mobile  : +971 50 675 2007
>>Office : +971 4 336 1100 x 259
>>
>>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>
>>
>>Please consider the environment before printing this e-mail
>>
>>
>
>
>
>
>--
>Rashyd Zaaboul
>Climate and Water Modeling Scientist
>International Center for Biosaline Agriculture
>P.O. Box 14660 Dubai, UAE
>Mobile  : +971 50 675 2007
>Office : +971 4 336 1100 x 259
>[email protected]<mailto:[email protected]><mailto:[email protected]<mailto:[email protected]>>
>
>Please consider the environment before printing this e-mail




--
Rashyd Zaaboul
Climate and Water Modeling Scientist
International Center for Biosaline Agriculture
P.O. Box 14660 Dubai, UAE
Mobile  : +971 50 675 2007
Office : +971 4 336 1100 x 259
[email protected]<mailto:[email protected]>

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