I also noticed a drastic increase in the number of linking warnings. This is on 64 bits SciLinux Carbon (6.6) with using the Intel compilers 14.0.0 20130728. I run some tests and everything seems to work just fine, so this might not be such a deal breaker.
George. libtool: install: warning: relinking `libmpi_usempif08.la' ifort: command line remark #10010: option '-pthread' is deprecated and will be removed in a future release. See '-help deprecated' ld: Warning: alignment 4 of symbol `ompi_f08_mpi_logical8' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_logical4' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_logical2' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_logical1' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_real2' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_2double_complex' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_2complex' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_2integer' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_2double_precision' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_2real' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_double_complex' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_complex32' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_complex16' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_complex8' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_complex' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_double_precision' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_real16' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_real8' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_real4' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_real' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_integer16' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_integer8' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_integer4' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_integer2' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_integer1' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_integer' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_logical' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_character' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_lb' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_ub' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_packed' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_byte' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_file_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_win_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_request_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_op_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_message_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_info_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_group_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_errhandler_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_datatype_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_comm_null' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_replace' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_minloc' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_maxloc' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_bxor' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_lxor' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_bor' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_lor' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_band' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_land' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_prod' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_sum' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_min' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_max' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_info_env' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_message_no_proc' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_errors_return' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_errors_are_fatal' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_group_empty' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_comm_self' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) ld: Warning: alignment 4 of symbol `ompi_f08_mpi_comm_world' in .libs/constants.o is smaller than 8 in ./.libs/libforce_usempif08_internal_modules_to_be_built.a(mpi-f08-types.o) On Thu, Dec 18, 2014 at 1:40 PM, Paul Hargrove <phhargr...@lbl.gov> wrote: > Jeff, > > See below for some failure details. > The look like different symptoms of the same issue. > > -Paul > > Open64 link failure: > > $ mpifort -g hello_mpifh.f -o hello_mpifh > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-open64/INST/lib/libmpi_mpifh.so: > undefined reference to `_Iso_c_binding' > collect2: ld returned 1 exit status > make[2]: *** [hello_mpifh] Error 1 > > Gcc build failure: > > libtool: compile: gfortran -DHAVE_CONFIG_H -I. > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h > -I../../../../opal/include -I../../../../orte/include > -I../../../../ompi/include -I../../../../oshmem/include > -I../../../../opal/mca/hwloc/hwloc191/hwloc/include/private/autogen > -I../../../../opal/mca/hwloc/hwloc191/hwloc/include/hwloc/autogen > -DOMPI_PROFILE_LAYER=0 -DOMPI_COMPILING_FORTRAN_WRAPPERS=1 > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5 > -I../../../.. > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/opal/include > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/orte/include > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/include > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/oshmem/include > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/opal/mca/hwloc/hwloc191/hwloc/include > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/BLD/opal/mca/hwloc/hwloc191/hwloc/include > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/opal/mca/event/libevent2021/libevent > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/opal/mca/event/libevent2021/libevent/include > -I/global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/BLD/opal/mca/event/libevent2021/libevent/include > -I../../../../ompi/mpi/fortran/use-mpi-tkr -g -c > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90 > -fPIC -o .libs/libmpi_mpifh_sizeof_la-sizeof-mpif08-pre-1.8.4_f.o > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:32 > > use, intrinsic :: ISO_C_BINDING > 1 > Error: Unclassifiable statement at (1) > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/omp > i/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:38 > > use, intrinsic :: ISO_C_BINDING > 1 > Error: Unclassifiable statement at (1) > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/omp > i/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:40 > > > INTEGER(KIND=C_SIGNED_CHAR), INTENT(IN) :: x > 1 > Error: Symbol 'c_signed_char' at (1) has no IMPLICIT type > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:50 > > use, intrinsic :: ISO_C_BINDING > 1 > Error: Unclassifiable statement at (1) > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:52 > > INTEGER(KIND=C_SIGNED_CHAR), INTENT(IN) :: x(*) > 1 > Error: Symbol 'c_signed_char' at (1) has no IMPLICIT type > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:64 > > use, intrinsic :: ISO_C_BINDING > 1 > Error: Unclassifiable statement at (1) > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:66 > > INTEGER(KIND=C_SHORT), INTENT(IN) :: x > 1 > Error: Symbol 'c_short' at (1) has no IMPLICIT type > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:76 > > use, intrinsic :: ISO_C_BINDING > 1 > Error: Unclassifiable statement at (1) > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:78 > > INTEGER(KIND=C_SHORT), INTENT(IN) :: x(*) > 1 > Error: Symbol 'c_short' at (1) has no IMPLICIT type > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:90 > > use, intrinsic :: ISO_C_BINDING > 1 > Error: Unclassifiable statement at (1) > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:92 > > INTEGER(KIND=C_INT), INTENT(IN) :: x > 1 > Error: Symbol 'c_int' at (1) has no IMPLICIT type > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:102 > > use, intrinsic :: ISO_C_BINDING > 1 > Error: Unclassifiable statement at (1) > In file > /global/homes/h/hargrove/GSCRATCH/OMPI/openmpi-1.8.4rc5-linux-x86_64-gcc-atomics/openmpi-1.8.4rc5/ompi/mpi/fortran/mpif-h/sizeof-mpif08-pre-1.8.4_f.F90:104 > > [...about 180 more lines of similar output...] > > On Thu, Dec 18, 2014 at 9:30 AM, Jeff Squyres (jsquyres) < > jsquy...@cisco.com> wrote: >> >> On Dec 18, 2014, at 11:55 AM, Paul Hargrove <phhargr...@lbl.gov> wrote: >> >> > + NEW: I see Fortran bindings failing to compile w/ gfortran >> > + NEW: I see Fortran bindings fail to link with Open64 >> >> Paul -- you make me sad. Sigh. >> >> Send some details of these failures when you can. >> >> Thanks! >> >> -- >> Jeff Squyres >> jsquy...@cisco.com >> For corporate legal information go to: >> http://www.cisco.com/web/about/doing_business/legal/cri/ >> >> _______________________________________________ >> devel mailing list >> de...@open-mpi.org >> Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/devel >> Link to this post: >> http://www.open-mpi.org/community/lists/devel/2014/12/16671.php >> > > > -- > Paul H. Hargrove phhargr...@lbl.gov > Computer Languages & Systems Software (CLaSS) Group > Computer Science Department Tel: +1-510-495-2352 > Lawrence Berkeley National Laboratory Fax: +1-510-486-6900 > > _______________________________________________ > devel mailing list > de...@open-mpi.org > Subscription: http://www.open-mpi.org/mailman/listinfo.cgi/devel > Link to this post: > http://www.open-mpi.org/community/lists/devel/2014/12/16677.php >
