Hi Robert, On Jul 22, 2015, at 4:47 PM, Robert Schmidt <[email protected]> wrote:
> Thanks for this. I just opened the 3.2.1-goolf-1.7.20 easyconfig PR. I'll see > if we should update any extensions. Check, thanks! I just updated the generator to include 'LibTIFF', '4.0.3' (was previously using a version provided by my Linux distro over here) and various others from 3.2.1-goolf-1.7.20 that I had not included yet. > Did you see the new Bioconductor Bundle (to separate it from the core?) No I completely missed that :o. Is this the "Standard Operating Procedure" the community has standardised on? If yes, I'd be happy to modify the generateEasyConfig.R to create to *.eb files - on for core and another for BioConductor. The more generic question I have is whether there is a SOP or good practice on when to make separate easyconfigs en when to bundle a bunch of tools/packages together in a single easyconfig. Making a separate easyconfig for each and every R package won't be fun, but updating the R name+version each time you add one R package also does not sound like a practical solution... The issue with Perl and additional Perl module, Python and additional eggs, etc... Cheers, Pi ------------------------------------------------------------- phone: +31 6 143 66 783 e-mail: [email protected] skype: pieter.online -------------------------------------------------------------
