Hi Alan, 

Thanks, I wasn't aware of the buildenv EasyBlock either, but it seems this may 
solve some problems I encountered in the past with compilers or flags that were 
not always correctly picked up by CMake. In the past, I sometimes passed these 
manually in the EasyConfigs, but that's a bit ugly. So, do I understand 
correctly that you load the buildenv EasyConfigs whenever you build new 
software through EasyBuild? Do you then add it as a build dependency to your 
existing EasyConfigs (which involves customizing existing EasyConfigs), or do 
you simply load the module before you run your 'eb some_easyconfig.eb'? 

And another question: if I need to load these modules to get CMake to do what I 
intend, what if a user uses e.g. the foss toolchain to build some of his own 
software that relies on CMake? Do you instruct your users to load the buildenv 
module in those cases? 

Finally, it makes me wonder if this (i.e. loading a compiler toolchain + 
seperate buildenv module) is the right design. To me, it seems very 
counterintuitive that loading the toolchain itself is not sufficient to have 
e.g. CMake pick up the correct compilers. Of course, toolchains are mostly 
loaded as dependencies for running production codes, in which case setting 
these variables would be unnecessary pollution of the environment. But other 
than that: is there any reason why the toolchains modules themselves don't set 
these build environments by default? (Kenneth, was this a conscious design 
decision, or did it just 'grow' like this?) 

Curious to hear what you (and others) think. Also, apart from Juelich, are 
other institutes running into the same problems that we are, and is are the 
buildenv blocks/configs also the way they solve it? For uniformity and 
reusability of EasyBlocks/Configs I think it would be good if 'we, the 
community' adopt a uniform solution for this issue. 

Cheers, 

Caspar 



From: "Alan O'Cais" <[email protected]> 
To: "easybuild" <[email protected]> 
Sent: Tuesday, 10 July, 2018 16:02:44 
Subject: Re: [easybuild] Loading toolchain module and CC/CXX env vars 

Hi Paul, 

There's a simple easyblock that implments this (for the toolchain): 
[ 
https://github.com/easybuilders/easybuild-easyblocks/blob/master/easybuild/easyblocks/generic/buildenv.py
 | 
https://github.com/easybuilders/easybuild-easyblocks/blob/master/easybuild/easyblocks/generic/buildenv.py
 ] 
You can see example uses in 
[ 
https://github.com/easybuilders/easybuild-easyconfigs/tree/develop/easybuild/easyconfigs/b/buildenv
 | 
https://github.com/easybuilders/easybuild-easyconfigs/tree/develop/easybuild/easyconfigs/b/buildenv
 ] 

Alan 

On Tue, 10 Jul 2018 at 15:56, Paul Melis < [ mailto:[email protected] | 
[email protected] ] > wrote: 


Hi, 

When developing software (in contrast to simply building and installing 
it with EB) it makes sense to leverage the existing toolchains for 
setting up a build environment. E.g. I load foss/2017b and other needed 
EB-built dependencies while developing and use CMake to build by hand. 
When the package gets to a stable point creating an EB config is then 
(relatively) easy and predictable, based on the loaded modules used. 
Rebuilding by hand is also a lot quicker than doing a full EB build and 
install each time. 

But loading a toolchain like foss/2017b doesn't completely set up the 
environment in a way that makes it directly usable by CMake and friends. 
Particularly, CC and CXX are not set so it's up to the build tool to 
figure out which compiler to use. 

CMake does this somewhat silly in that it searches for (in order) cc, 
gcc, cl, bcc, ... when CC is not set (and similarly c++, g++, aCC, cl, 
... when CXX is not set). But this is a breadth-first search of "cc" in 
a set of directories. So in our case it actually finds /usr/bin/cc (and 
/usr/bin/c++ next to it) which are old, GCC 4.8.5, and it doesn't find 
the foss/2017b binaries. This appears to be because GCC installations 
don't contain the "cc" command (even though they have a "c++" one), 
which is what CMake searches for first. 

Setting CC and CXX to the foss/2017b compilers will fix this, which kind 
of makes me wonder why these aren't set by default when loading 
GCC(core) and similar compiler modules? Has this ever been discussed? 

Regards, 
Paul 

-- 

Paul Melis 
| Visualization group leader & developer | SURFsara | 
| Science Park 140 | 1098 XG Amsterdam | 
| T 020 800 1312 | [ mailto:[email protected] | [email protected] ] | 
[ http://www.surfsara.nl/ | www.surfsara.nl ] | 





-- 
Dr. Alan O'Cais 
E-CAM Software Manager 
Juelich Supercomputing Centre 
Forschungszentrum Juelich GmbH 
52425 Juelich, Germany 

Phone: +49 2461 61 5213 
Fax: +49 2461 61 6656 
E-mail: [ mailto:[email protected] | [email protected] ] 
WWW: [ http://www.fz-juelich.de/ias/jsc/EN | 
http://www.fz-juelich.de/ias/jsc/EN ] 


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